RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 VRK2Q86Y07 508 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 GPR137CQ8N3F9 429 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 NUP37Q8NFH4 326 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 PNPT1Q8TCS8 783 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 AENQ8WTP8 325 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 HPS1Q92902 700 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 SLC25A36Q96CQ1 311 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 ITCHQ96J02 903 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 TEX37Q96LM6 180 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 SORT1Q99523 831 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 PAIP2Q9BPZ3 127 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 C19orf24Q9BVV8 132 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 PRR14Q9BWN1 585 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 SPATA9Q9BWV2 254 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 C20orf27Q9GZN8 174 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 CENPHQ9H3R5 247 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 RAD21L1Q9H4I0 556 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 ZNF442Q9H7R0 627 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 PNPOQ9NVS9 261 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 RPS6KB2Q9UBS0 482 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 ZNF443Q9Y2A4 671 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 SPEF1Q9Y4P9 236 aa9.67□□□□□ -0.86
UBE2D3-219ENST00000505207 A0A096LPE4 126 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 A0A1W2PPZ6 126 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 RPL36A-HNRNPH2H7BZ11 118 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 hCG_2039718K7EN88 272 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 FRS3O43559 492 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 IGLV1-44P01699 117 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 BCHEP06276 602 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 C8BP07358 591 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 CECR9P0C854 216 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 DAOP14920 347 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 GIFP27352 417 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 SRP14P37108 136 aaKnown RBP9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 CDKN2CP42773 168 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 BNIP2Q12982 314 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 ZNF311Q5JNZ3 666 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 NXNQ6DKJ4 435 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 WDR93Q6P2C0 686 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 MSANTD1Q6ZTZ1 278 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 SNX32Q86XE0 403 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 MREGQ8N565 214 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 ARIH2OSQ8N7S6 290 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 ANKS4BQ8N8V4 417 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 PIK3C3Q8NEB9 887 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 SLC38A5Q8WUX1 472 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 OXGR1Q96P68 337 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 ALKBH3Q96Q83 286 aaPredicted RBP9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 TPT1P8Q9HAU6 139 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 DYNLRB1Q9NP97 96 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 THAP1Q9NVV9 213 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 SELENONQ9NZV5 590 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 GPR45Q9Y5Y3 372 aa9.66□□□□□ -0.86
UBE2D3-219ENST00000505207 ARFGEF3Q5TH69 2177 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 NBEAL1Q6ZS30 2694 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 DSPPQ9NZW4 1301 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 YLPM1P49750 1951 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 SLC35F4A4IF30 521 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 C5orf58C9J3I9 102 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 NR5A2O00482 541 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 SDHDO14521 159 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 AIM2O14862 343 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 NPIPB7O75200 414 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 UPK3AO75631 287 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 STAMBPO95630 424 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 IGKV3-15P01624 115 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 ALDOCP09972 364 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 PNMTP11086 282 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 ETFAP13804 333 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 IL12AP29459 219 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 P2RY4P51582 365 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 CLDN17P56750 224 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 ARF1P84077 181 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 IL1RL1Q01638 556 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 BST1Q10588 318 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 MFSD13AQ14CX5 517 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 CR1LQ2VPA4 569 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 ATG16L1Q676U5 607 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 REP15Q6BDI9 236 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 SPATA21Q7Z572 469 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 EPHX4Q8IUS5 362 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 ZNF786Q8N393 782 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 RFLNBQ8N5W9 214 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 LINC01356Q8N9X3 169 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 UBASH3BQ8TF42 649 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 SLC38A4Q969I6 547 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 BPESC1Q9GZL8 116 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 C12orf10Q9HB07 376 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 B3GAT2Q9NPZ5 323 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 USP22Q9UPT9 525 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 CMAHPQ9Y471 501 aa9.65□□□□□ -0.86
UBE2D3-219ENST00000505207 LOC102725191A0A1B0GVB3 256 aa9.64□□□□□ -0.87
UBE2D3-219ENST00000505207 TMEM229AB2RXF0 380 aa9.64□□□□□ -0.87
UBE2D3-219ENST00000505207 TCF21O43680 179 aa9.64□□□□□ -0.87
UBE2D3-219ENST00000505207 IFNGR1P15260 489 aa9.64□□□□□ -0.87
UBE2D3-219ENST00000505207 APEX1P27695 318 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-219ENST00000505207 EPHA3P29320 983 aa9.64□□□□□ -0.87
UBE2D3-219ENST00000505207 THBS4P35443 961 aa9.64□□□□□ -0.87
UBE2D3-219ENST00000505207 RPS5P46782 204 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms