RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MAP1LC3BQ9GZQ8 125 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SCUBE2Q9NQ36 999 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 THSD1Q9NS62 852 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 RAI2Q9Y5P3 530 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF609O15014 1411 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 FMN2Q9NZ56 1722 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 KIF20BQ96Q89 1820 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 DAPL1A0PJW8 107 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 FAM170BA6NMN3 283 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SLC31A1O15431 190 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 DNPH1O43598 174 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 CLIC3O95833 236 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 FCER1AP12319 257 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 GLB1P16278 677 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ITPKBP27987 946 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 LTBRP36941 435 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 POLR2HP52434 150 aaKnown RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 RAB1AP62820 205 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ENPP7Q6UWV6 458 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 DRAM2Q6UX65 266 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 FA2HQ7L5A8 372 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 IQCF1Q8N6M8 205 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 PHOSPHO2Q8TCD6 241 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 DVL3Q92997 716 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 KIR3DX1Q9H7L2 352 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TLE6Q9H808 572 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 FBXO4Q9UKT5 387 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 KIF1AQ12756 1690 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TBC1D3FA6NER0 549 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 NEURL1BA8MQ27 555 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ETHE1O95571 254 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 C1SP09871 688 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SPATA31C1P0DKV0 1188 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TM4SF4P48230 202 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SLAMF1Q13291 335 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 RBBP7Q16576 425 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 HIST3H3Q16695 136 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 NSUN5P2Q63ZY6 315 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SHISA2Q6UWI4 295 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SV2AQ7L0J3 742 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ZFP62Q8NB50 900 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 CHST14Q8NCH0 376 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SLC35E1Q96K37 410 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 DGAT2Q96PD7 388 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 PNMA5Q96PV4 448 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 HHIPQ96QV1 700 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 F2RL3Q96RI0 385 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SHARPINQ9H0F6 387 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 C20orf85Q9H1P6 137 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 UBQLN3Q9H347 655 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ABHD16BQ9H3Z7 469 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SCML2Q9UQR0 700 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 LRP5LA4QPB2 252 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 M0R1X1 148 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 PIRO00625 290 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 EPHB6O15197 1021 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TMPRSS11DO60235 418 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 RAB40ALP0C0E4 278 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 CEACAM1P13688 526 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 HIST1H1BP16401 226 aaKnown RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 FPR1P21462 350 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TAS2R50P59544 299 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SEMA3BQ13214 749 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 OCIAD2Q56VL3 154 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF776Q68DI1 518 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 STPG2Q8N412 459 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 NETO2Q8NC67 525 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 RDH11Q8TC12 318 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 RNASEH2CQ8TDP1 164 aaKnown RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ASB13Q8WXK3 278 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM47Q9BQJ4 181 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 LXNQ9BS40 222 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 C1QTNF6Q9BXI9 259 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SYT4Q9H2B2 425 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 POMKQ9H5K3 350 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 FKBPLQ9UIM3 349 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM184BQ9Y519 407 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 PDXKO00764 312 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 CXCL11O14625 94 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 MT-ND1P03886 318 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TCRBP04435 133 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 CRHBPP24387 322 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 IFNGR2P38484 337 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 CDX1P47902 265 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 LSM11P83369 360 aaKnown RBP eCLIP5.8□□□□□ -1.484e-43■■■□□ 15.4
CLCN3-204ENST00000504131 CCL15Q16663 113 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ATP6AP1LQ52LC2 224 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TIGD5Q53EQ6 642 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 KHDC1LQ5JSQ8 128 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 REEP3Q6NUK4 255 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 BTNL3Q6UXE8 466 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ARRDC1Q8N5I2 433 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ACBD7Q8N6N7 88 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ZFP41Q8N8Y5 198 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 C1orf127Q8N9H9 656 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 OR10G3Q8NGC4 313 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 OR51S1Q8NGJ8 323 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF480Q8WV37 535 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms