RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CKAP2Q8WWK9 683 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 KTI12Q96EK9 354 aaPredicted RBP10.47□□□□□ -0.73
MED28-203ENST00000503945 SLC47A1Q96FL8 570 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 BOD1Q96IK1 185 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 EVA1AQ9H8M9 152 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 VIPAS39Q9H9C1 493 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 OBP2BQ9NPH6 170 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
MED28-203ENST00000503945 PMF1-BGLAPU3KQ54 211 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 ABCA1O95477 2261 aa10.47□□□□□ -0.73
MED28-203ENST00000503945 VSTM5A8MXK1 200 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 TMEM229AB2RXF0 380 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 FTCDNL1E5RQL4 147 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 AIM2O14862 343 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 ANGPT2O15123 496 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 IGHV4-39P01824 125 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
MED28-203ENST00000503945 HOXB9P17482 250 aaPredicted RBP10.46□□□□□ -0.73
MED28-203ENST00000503945 SELENOPP49908 381 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 CLDN17P56750 224 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 DSCR9P59020 149 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 NCALDP61601 193 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 IL1RL1Q01638 556 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 EGR4Q05215 589 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 MFSD13AQ14CX5 517 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 ADRM1Q16186 407 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 HIKESHIQ53FT3 197 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 FAM69AQ5T7M9 428 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 METTL21CQ5VZV1 264 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 FAM91A1Q658Y4 838 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 DLEU7Q6UYE1 221 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 ARMC8Q8IUR7 673 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 HIPK4Q8NE63 616 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 SLC38A4Q969I6 547 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 TAAR8Q969N4 342 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 ZNF317Q96PQ6 595 aaPredicted RBP10.46□□□□□ -0.73
MED28-203ENST00000503945 EPYCQ99645 322 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 KCNS3Q9BQ31 491 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 PRR14Q9BWN1 585 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 CACNG6Q9BXT2 260 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 LINC00470Q9BZP3 86 aa10.46□□□□□ -0.73
MED28-203ENST00000503945 LEF1Q9UJU2 399 aaPredicted RBP10.46□□□□□ -0.73
MED28-203ENST00000503945 TRAV36DV7A0A075B6V5 113 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 LOC102725191A0A1B0GVB3 256 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 A0A1B0GWA3 101 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 M0QX08 132 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 NDUFS7O75251 213 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 SLC43A1O75387 559 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 UPK3AO75631 287 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 LGI1O95970 557 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 AQP1P29972 269 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 NUDT6P53370 316 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 RGS8P57771 180 aaPredicted RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 OR1Q1Q15612 314 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 ANKRD16Q6P6B7 361 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 C6orf89Q6UWU4 347 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 RANBP3LQ86VV4 465 aaPredicted RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 LSRQ86X29 649 aaPredicted RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 GPR137CQ8N3F9 429 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 C10orf53Q8N6V4 93 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 C11orf65Q8NCR3 313 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 OR1K1Q8NGR3 316 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 TSPEARQ8WU66 669 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 NANOS1Q8WY41 292 aaKnown RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 BCL2L2Q92843 193 aaPredicted RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 THOC1Q96FV9 657 aaKnown RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 SIKE1Q9BRV8 207 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 PTDSS2Q9BVG9 487 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 MOV10Q9HCE1 1003 aaKnown RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 MOKQ9UQ07 419 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 ANGPT4Q9Y264 503 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 ALPK2Q86TB3 2170 aa10.45□□□□□ -0.74
MED28-203ENST00000503945 YLPM1P49750 1951 aaKnown RBP10.45□□□□□ -0.74
MED28-203ENST00000503945 A0A087WUJ7 227 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 A0A096LPE4 126 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 TRBV5-3A0A0A0MS03 114 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 A0A0G2JND7 137 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 A0A1W2PPZ6 126 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 MS4A18H0YCH9 400 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 RPL36A-HNRNPH2H7BZ11 118 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 AKAP8O43823 692 aaKnown RBP10.44□□□□□ -0.74
MED28-203ENST00000503945 MFN2O95140 757 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 CRYAAP02489 173 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 C8BP07358 591 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 NQO1P15559 274 aaKnown RBP10.44□□□□□ -0.74
MED28-203ENST00000503945 CBLP22681 906 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 HTR2AP28223 471 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 GRPRP30550 384 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 SH3BGRP55822 239 aaPredicted RBP10.44□□□□□ -0.74
MED28-203ENST00000503945 ROR2Q01974 943 aaKnown RBP10.44□□□□□ -0.74
MED28-203ENST00000503945 LGALS3BPQ08380 585 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 SPOCK1Q08629 439 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 RBBP4Q09028 425 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 PMS2P3Q13401 168 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 CYP51A1Q16850 503 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 MS4A18Q3C1V0 323 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 TBRG1Q3YBR2 411 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 GLIPR1L2Q4G1C9 344 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 CCDC36Q8IYA8 594 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms