RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 RHOAP61586 193 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 MYL5Q02045 173 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 UBXN1Q04323 297 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 PPP1R8Q12972 351 aaKnown RBP4.24□□□□□ -1.73
NIPBL-203ENST00000503274 ELOCQ15369 112 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 CD226Q15762 336 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 CLPPQ16740 277 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-203ENST00000503274 MICAQ29983 383 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 HFEQ30201 348 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 PARP15Q460N3 678 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 CCDC14Q49A88 953 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 FILIP1LQ4L180 1135 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 CGB2Q6NT52 195 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 DNAJC24Q6P3W2 148 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 GCNT7Q6ZNI0 430 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 BNIPLQ7Z465 357 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 PHF13Q86YI8 300 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-203ENST00000503274 SPC24Q8NBT2 197 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 OR6C4Q8NGE1 309 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 LMX1AQ8TE12 382 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 FAM172AQ8WUF8 416 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 NTAN1Q96AB6 310 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 NAP1L3Q99457 506 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-203ENST00000503274 CNPY3Q9BT09 278 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 TIGARQ9NQ88 270 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 PARVAQ9NVD7 372 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 COPS7AQ9UBW8 275 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 CA5BQ9Y2D0 317 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 MFHAS1Q9Y4C4 1052 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 PRRC2CQ9Y520 2896 aaKnown RBP4.24□□□□□ -1.73
NIPBL-203ENST00000503274 BOD1L1Q8NFC6 3051 aa4.24□□□□□ -1.73
NIPBL-203ENST00000503274 ASH1LQ9NR48 2969 aaKnown RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 A0A1W2PQ67 120 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 MACROD2A1Z1Q3 448 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 ARHGAP42A6NI28 874 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 CCT8L1PA6NM43 557 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 PRPSAP2O60256 369 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 TSC22D2O75157 780 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 PDE5AO76074 875 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 MBD3O95983 291 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 GIG44P09565 113 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 PGAM2P15259 253 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 FASP25445 335 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 SAA4P35542 130 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 CSNK1DP48730 415 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 TPI1P60174 286 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 PFN3P60673 137 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 PAX2Q02962 417 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 CCDC173Q0VFZ6 552 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 FZD2Q14332 565 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 RFTN1Q14699 578 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 CDKN3Q16667 212 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 SEL1L2Q5TEA6 688 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 RSBN1Q5VWQ0 802 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 WDR59Q6PJI9 974 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 EFL1Q7Z2Z2 1120 aaKnown RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 VPS36Q86VN1 386 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 GKN2Q86XP6 184 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 UMODL1-AS1Q8N2C9 162 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 PYROXD2Q8N2H3 581 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 BBS5Q8N3I7 341 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 OR6K2Q8NGY2 324 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 DTD2Q96FN9 168 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 BMFQ96LC9 184 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 ZNF641Q96N77 438 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 MCEEQ96PE7 176 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 SIGLEC12Q96PQ1 595 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 NDUFA13Q9P0J0 144 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 Q9UF83 564 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 APOBEC3BQ9UH17 382 aaKnown RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 KLHDC2Q9Y2U9 406 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 TDRKHQ9Y2W6 561 aaKnown RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 KIF25-AS1Q9Y6Z4 181 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 RP1L1Q8IWN7 2480 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 UNC13CQ8NB66 2214 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 SHROOM3Q8TF72 1996 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 TLN1Q9Y490 2541 aaKnown RBP4.23□□□□□ -1.73
NIPBL-203ENST00000503274 COL6A6A6NMZ7 2263 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 MYLKQ15746 1914 aa4.23□□□□□ -1.73
NIPBL-203ENST00000503274 TENM4Q6N022 2769 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 RP1P56715 2156 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 EFCAB7A8K855 629 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 CFLARO15519 480 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 TYROBPO43914 113 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 PALMO75781 387 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 NEBLO76041 1014 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 SYNGR4O95473 234 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 CD160O95971 181 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 TNFP01375 233 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 PVRP15151 417 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 PSMA2P25787 234 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 SLC25A1P53007 311 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 TPM4P67936 248 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 IGLV3-21P80748 117 aaPredicted RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 BCL2L1Q07817 233 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 EIF3IQ13347 325 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 LASP1Q14847 261 aaKnown RBP4.22□□□□□ -1.73
NIPBL-203ENST00000503274 ISXQ2M1V0 245 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 KLHL40Q2TBA0 621 aa4.22□□□□□ -1.73
NIPBL-203ENST00000503274 DEFB133Q30KQ1 61 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms