RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 C11orf88Q6PI97 169 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 SLC16A9Q7RTY1 509 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 OR5J2Q8NH18 312 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 SENP5Q96HI0 755 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 HSPA12BQ96MM6 686 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 SMAD5Q99717 465 aaKnown RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 AICDAQ9GZX7 198 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 QRSL1Q9H0R6 528 aaKnown RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 LRRN3Q9H3W5 708 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 RANGRFQ9HD47 186 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 MEPEQ9NQ76 525 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 RARRES3Q9UL19 164 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 MAB21L2Q9Y586 359 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 ETV7Q9Y603 341 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 TCF20Q9UGU0 1960 aaKnown RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 E9PI62 339 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 FAM227AF5H4B4 570 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 TP53I11O14683 189 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 FRS3O43559 492 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 PPP1R3DO95685 299 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 LIMS3P0CW19 117 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 LIMS4P0CW20 117 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 S100A2P29034 98 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 CCKBRP32239 447 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 EMDP50402 254 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 SIRPAP78324 504 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 NDUFAF6Q330K2 333 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 CCNJQ5T5M9 372 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 FAM69AQ5T7M9 428 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 TTLL10Q6ZVT0 673 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 SPRED2Q7Z698 418 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 NLGN4XQ8N0W4 816 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 PLPP5Q8NEB5 264 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 COQ8AQ8NI60 647 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 CNOT9Q92600 299 aaKnown RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 TMEM203Q969S6 136 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 S100A16Q96FQ6 103 aaKnown RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 RADILQ96JH8 1075 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 TINAGL1Q9GZM7 467 aaPredicted RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 CHRDQ9H2X0 955 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF768Q9H5H4 540 aaKnown RBP6.8□□□□□ -1.32
PDGFC-203ENST00000502773 UBQLN2Q9UHD9 624 aa6.8□□□□□ -1.32
PDGFC-203ENST00000502773 EPOPA6NHQ4 379 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 GKN3PP0CG01 181 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 HLA-DMAP28067 261 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 STARD6P59095 220 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 EGR3Q06889 387 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 SMAD2Q15796 467 aaKnown RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 RCBTB1Q8NDN9 531 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 OR5M3Q8NGP4 307 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 OR4Q3Q8NH05 313 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 CEP76Q8TAP6 659 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 ABHD4Q8TB40 342 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 ST8SIA1Q92185 356 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 TTC9Q92623 222 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 TRAF4Q9BUZ4 470 aaPredicted RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 OR8D2Q9GZM6 311 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 DUSP15Q9H1R2 295 aaPredicted RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 GPN1Q9HCN4 374 aaPredicted RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 PPIEQ9UNP9 301 aaKnown RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF281Q9Y2X9 895 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 IER3IP1Q9Y5U9 82 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 TRBV2A0A0J9YWF9 115 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 MCIDASD6RGH6 385 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 F8W036 122 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 PRAF2O60831 178 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 UTS2O95399 124 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF823P16415 610 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 CD79BP40259 229 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 DAP3P51398 398 aaKnown RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 RAB2AP61019 212 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 C17orf67Q0P5P2 114 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 MGAT2Q10469 447 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 NSDHLQ15738 373 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 LAIR1Q6GTX8 287 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 C17orf107Q6ZR85 190 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 FAM181AQ8N9Y4 354 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 C16orf52Q8NHV5 167 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 DDIT4LQ96D03 193 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 TNFRSF13CQ96RJ3 184 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 RBFOX1Q9NWB1 397 aaKnown RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 NKIRAS2Q9NYR9 191 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 LAMP5Q9UJQ1 280 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 CTDSP2O14595 271 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 PIAS2O75928 621 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 EML2O95834 649 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 SDHAP31040 664 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 PYCR1P32322 319 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 EVX1P49640 407 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 AP2S1P53680 142 aaPredicted RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 RPS25P62851 125 aaKnown RBP6.79□□□□□ -1.32
PDGFC-203ENST00000502773 RNF4P78317 190 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 ACSM3Q53FZ2 586 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 EEF1A1P5Q5VTE0 462 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 FAM180AQ6UWF9 173 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 D2HGDHQ8N465 521 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 OR4F15Q8NGB8 312 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 OR13C2Q8NGS9 318 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 AKR7LQ8NHP1 331 aa6.79□□□□□ -1.32
PDGFC-203ENST00000502773 ZC3HAV1LQ96H79 300 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms