RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 RDH5Q92781 318 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 MRPL24Q96A35 216 aaKnown RBP12□□□□□ -0.49
CCDC58-207ENST00000498466 NEURL3Q96EH8 262 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 MECRQ9BV79 373 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 MRPL37Q9BZE1 423 aaKnown RBP12□□□□□ -0.49
CCDC58-207ENST00000498466 DPY30Q9C005 99 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 MS4A5Q9H3V2 200 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
CCDC58-207ENST00000498466 RASD1Q9Y272 281 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 TRRAPQ9Y4A5 3859 aa12□□□□□ -0.49
CCDC58-207ENST00000498466 LOC105371242A0A075B767 164 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 TRAV20A0A0B4J274 112 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 PRSS51A0A1B0GVH4 220 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF503-AS2A6NEH8 195 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 A8MVM7 634 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 TMEM229AB2RXF0 380 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 HMGN4O00479 90 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 PPIHO43447 177 aaKnown RBP11.99□□□□□ -0.49
CCDC58-207ENST00000498466 FRS3O43559 492 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 EVX1P49640 407 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 CLDN17P56750 224 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 EMX2Q04743 252 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF311Q5JNZ3 666 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 ANXA8L1Q5VT79 327 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 KDM8Q8N371 416 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 GPR137CQ8N3F9 429 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 CADM2Q8N3J6 435 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 VPS37AQ8NEZ2 397 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 C16orf45Q96MC5 204 aaPredicted RBP11.99□□□□□ -0.49
CCDC58-207ENST00000498466 TRNT1Q96Q11 434 aaKnown RBP11.99□□□□□ -0.49
CCDC58-207ENST00000498466 SLC35A5Q9BS91 424 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 SUCNR1Q9BXA5 334 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 RACGAP1Q9H0H5 632 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 SLC38A1Q9H2H9 487 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF275Q9NSD4 429 aaPredicted RBP11.99□□□□□ -0.49
CCDC58-207ENST00000498466 ZDHHC2Q9UIJ5 367 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 PCDHGB1Q9Y5G3 927 aa11.99□□□□□ -0.49
CCDC58-207ENST00000498466 RPL36A-HNRNPH2H7BZ11 118 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 SLC43A1O75387 559 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 DBIP07108 87 aaKnown RBP11.98□□□□□ -0.49
CCDC58-207ENST00000498466 GKN3PP0CG01 181 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF43P17038 809 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 NR4A1P22736 598 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 ALDH3B1P43353 468 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 TMEM33P57088 247 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 COPZ1P61923 177 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 MYBPC1Q00872 1141 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 MSMPQ1L6U9 139 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 CEACAM16Q2WEN9 425 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 C1orf140Q5VVS0 124 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 REP15Q6BDI9 236 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 LRRC74BQ6ZQY2 392 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 C1orf229Q6ZS94 237 aaPredicted RBP11.98□□□□□ -0.49
CCDC58-207ENST00000498466 RNF130Q86XS8 419 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF440Q8IYI8 595 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 SYT3Q9BQG1 590 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF696Q9H7X3 374 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 MTHFD2LQ9H903 347 aaPredicted RBP11.98□□□□□ -0.49
CCDC58-207ENST00000498466 GPR35Q9HC97 309 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 RLIMQ9NVW2 624 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 ASIC5Q9NY37 505 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 NOX1Q9Y5S8 564 aa11.98□□□□□ -0.49
CCDC58-207ENST00000498466 TGP01266 2768 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 SEC14L2O76054 403 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 BCL10O95999 233 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 AVPP01185 164 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 C1QCP02747 245 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 TFPTP0C1Z6 253 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 ANPEPP15144 967 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 RPS4Y1P22090 263 aaKnown RBP11.97□□□□□ -0.49
CCDC58-207ENST00000498466 GTF2E2P29084 291 aaKnown RBP11.97□□□□□ -0.49
CCDC58-207ENST00000498466 ARRB2P32121 409 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 SEC24CP53992 1094 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 LMO4P61968 165 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 DEFA6Q01524 100 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 MAD2L1BPQ15013 274 aaPredicted RBP11.97□□□□□ -0.49
CCDC58-207ENST00000498466 GKAP1Q5VSY0 366 aaPredicted RBP11.97□□□□□ -0.49
CCDC58-207ENST00000498466 WBP2NLQ6ICG8 309 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 SHISA2Q6UWI4 295 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 CCDC36Q8IYA8 594 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 PEX5LQ8IYB4 626 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 RIBC1Q8N443 379 aaPredicted RBP11.97□□□□□ -0.49
CCDC58-207ENST00000498466 BPIFB2Q8N4F0 458 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 EPS8L3Q8TE67 593 aaKnown RBP11.97□□□□□ -0.49
CCDC58-207ENST00000498466 YIPF5Q969M3 257 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 SLC25A36Q96CQ1 311 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF837Q96EG3 531 aaPredicted RBP11.97□□□□□ -0.49
CCDC58-207ENST00000498466 APOPT1Q96IL0 206 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 PPP1R36Q96LQ0 422 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 SLC6A7Q99884 636 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF747Q9BV97 191 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 SLC52A3Q9NQ40 469 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 RCE1Q9Y256 329 aa11.97□□□□□ -0.49
CCDC58-207ENST00000498466 ZNF432O94892 652 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 AHSA1O95433 338 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 HLA-HP01893 362 aa11.96□□□□□ -0.49
CCDC58-207ENST00000498466 GSNP06396 782 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms