RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IL23RQ5VWK5 629 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 SYT10Q6XYQ8 523 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 RNF165Q6ZSG1 346 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 ZNF572Q7Z3I7 529 aaPredicted RBP10.02□□□□□ -0.81
CDK9-205ENST00000498339 GPR137CQ8N3F9 429 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 IL17RDQ8NFM7 739 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 KIF18AQ8NI77 898 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 MGARPQ8TDB4 240 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 COQ8BQ96D53 544 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 TMPRSS13Q9BYE2 586 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 LINC00470Q9BZP3 86 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 RACGAP1Q9H0H5 632 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 PIF1Q9H611 641 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 G6PC2Q9NQR9 355 aa10.02□□□□□ -0.81
CDK9-205ENST00000498339 A0A1W2PPM1 405 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 ZNF503-AS2A6NEH8 195 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 CFAP73A6NFT4 308 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 FRS3O43559 492 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 PLPP2O43688 288 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 CDC14BO60729 498 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 SLC43A1O75387 559 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 NCR1O76036 304 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 VAMP5O95183 116 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 GSNP06396 782 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 NAT2P11245 290 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 NR4A1P22736 598 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 CCT5P48643 541 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 EVX1P49640 407 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 CLDN17P56750 224 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 RPS23P62266 143 aaKnown RBP10.01□□□□□ -0.81
CDK9-205ENST00000498339 PLAURQ03405 335 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 FUT5Q11128 374 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 BNIP2Q12982 314 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 GNA13Q14344 377 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 NKPD1Q17RQ9 610 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 CEACAM16Q2WEN9 425 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 TRMT5Q32P41 509 aaKnown RBP10.01□□□□□ -0.81
CDK9-205ENST00000498339 GLIPR1L2Q4G1C9 344 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 OR4F3Q6IEY1 312 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 ZNF771Q7L3S4 317 aaPredicted RBP10.01□□□□□ -0.81
CDK9-205ENST00000498339 C10orf107Q8IVU9 208 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 CADM2Q8N3J6 435 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 ZG16BQ96DA0 208 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 C1QTNF5Q9BXJ0 243 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 DPY30Q9C005 99 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 DUSP13Q9UII6 198 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 MID2Q9UJV3 735 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 RASD1Q9Y272 281 aa10.01□□□□□ -0.81
CDK9-205ENST00000498339 ARHGAP32A7KAX9 2087 aa10□□□□□ -0.81
CDK9-205ENST00000498339 J3QLI3 93 aa10□□□□□ -0.81
CDK9-205ENST00000498339 COPEO14579 308 aa10□□□□□ -0.81
CDK9-205ENST00000498339 ZNF432O94892 652 aa10□□□□□ -0.81
CDK9-205ENST00000498339 CPSF4O95639 269 aaKnown RBP10□□□□□ -0.81
CDK9-205ENST00000498339 CHRNGP07510 517 aa10□□□□□ -0.81
CDK9-205ENST00000498339 NUDT17P0C025 328 aa10□□□□□ -0.81
CDK9-205ENST00000498339 IL7RP16871 459 aa10□□□□□ -0.81
CDK9-205ENST00000498339 ZNF43P17038 809 aa10□□□□□ -0.81
CDK9-205ENST00000498339 RAD52P43351 418 aa10□□□□□ -0.81
CDK9-205ENST00000498339 EPS8Q12929 822 aa10□□□□□ -0.81
CDK9-205ENST00000498339 MRPL2Q5T653 305 aaKnown RBP10□□□□□ -0.81
CDK9-205ENST00000498339 LRP11Q86VZ4 500 aa10□□□□□ -0.81
CDK9-205ENST00000498339 ANKRD46Q86W74 232 aa10□□□□□ -0.81
CDK9-205ENST00000498339 TREML1Q86YW5 311 aa10□□□□□ -0.81
CDK9-205ENST00000498339 EPHX4Q8IUS5 362 aa10□□□□□ -0.81
CDK9-205ENST00000498339 CMIPQ8IY22 773 aa10□□□□□ -0.81
CDK9-205ENST00000498339 KDM8Q8N371 416 aa10□□□□□ -0.81
CDK9-205ENST00000498339 SIGLECL1Q8N7X8 197 aa10□□□□□ -0.81
CDK9-205ENST00000498339 RNF217Q8TC41 542 aa10□□□□□ -0.81
CDK9-205ENST00000498339 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
CDK9-205ENST00000498339 GATA5Q9BWX5 397 aaPredicted RBP10□□□□□ -0.81
CDK9-205ENST00000498339 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
CDK9-205ENST00000498339 GPR35Q9HC97 309 aa10□□□□□ -0.81
CDK9-205ENST00000498339 MYEF2Q9P2K5 600 aaKnown RBP10□□□□□ -0.81
CDK9-205ENST00000498339 ZDHHC2Q9UIJ5 367 aa10□□□□□ -0.81
CDK9-205ENST00000498339 DNAJC9-AS1A6NH13 148 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 A8MVM7 634 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 RIPK2O43353 540 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 TPD52L2O43399 206 aaKnown RBP9.99□□□□□ -0.81
CDK9-205ENST00000498339 AKAP8O43823 692 aaKnown RBP9.99□□□□□ -0.81
CDK9-205ENST00000498339 AHSA1O95433 338 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 HLA-HP01893 362 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 GUSBP08236 651 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 G6PDP11413 515 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 UQCRC2P22695 453 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 ECHS1P30084 290 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 LSP1P33241 339 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 MAGEB1P43366 347 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 COPZ1P61923 177 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 PIGFQ07326 219 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 C1DQ13901 141 aaKnown RBP9.99□□□□□ -0.81
CDK9-205ENST00000498339 MSMPQ1L6U9 139 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 GSG1Q2KHT4 349 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 ARMCX4Q5H9R4 360 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 C6orf136Q5SQH8 315 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 C1orf140Q5VVS0 124 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 ATG16L1Q676U5 607 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 ZCCHC23Q6ZST2 131 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 HOMEZQ8IX15 550 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 MIPOL1Q8TD10 442 aa9.99□□□□□ -0.81
CDK9-205ENST00000498339 MZB1Q8WU39 189 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms