RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PDCD6IPQ8WUM4 868 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 PIH1D2Q8WWB5 315 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 RLN3Q8WXF3 142 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ATP6V1E2Q96A05 226 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TADA1Q96BN2 335 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TBC1D31Q96DN5 1066 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TMA16Q96EY4 203 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 IMP4Q96G21 291 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 RPGRIP1Q96KN7 1286 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 SPATA13Q96N96 652 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 RPRD1AQ96P16 312 aaPredicted RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 TSGA13Q96PP4 275 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ZNF317Q96PQ6 595 aaPredicted RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 KCNA7Q96RP8 456 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TRIB3Q96RU7 358 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CCT8L2Q96SF2 557 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 FMO2Q99518 471 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 SORT1Q99523 831 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 EBNA1BP2Q99848 306 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 TBL1YQ9BQ87 522 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 FEM1AQ9BSK4 669 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ST6GALNAC5Q9BVH7 336 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 FUNDC2Q9BWH2 189 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 TRABDQ9H4I3 376 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 POMKQ9H5K3 350 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 FAM114A2Q9NRY5 505 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ACOXLQ9NUZ1 547 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 FGFR1OP2Q9NVK5 253 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 ARGLU1Q9NWB6 273 aaPredicted RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 ELOVL2Q9NXB9 296 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 UXTQ9UBK9 157 aaPredicted RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 FBXW2Q9UKT8 454 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 UTP11Q9Y3A2 253 aaKnown RBP2.11□□□□□ -2.07
RIF1-212ENST00000498041 FIS1Q9Y3D6 152 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 HTTP42858 3142 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 CENPFP49454 3210 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 REV3LO60673 3130 aa2.11□□□□□ -2.07
RIF1-212ENST00000498041 PRRC2AP48634 2157 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 NOTCH2Q04721 2471 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 NUP214P35658 2090 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 IGHV3OR16-12A0A075B7B8 117 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 LOC285095A0A1B0GVY8 99 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SMIM30A4D0T7 59 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 FAM159BA6NKW6 160 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 K7EQS6 105 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SAP18O00422 153 aaKnown RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 TAPBPO15533 448 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ZBTB14O43829 449 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 WISP3O95389 354 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 NUDT14O95848 222 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 LY6G6DO95868 133 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 OLFM2O95897 454 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 APOEP02649 317 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 UGT2B4P06133 528 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 C2P06681 752 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 RHOCP08134 193 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SERPINF2P08697 491 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 CCDC166P0CW27 439 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SLC1A2P43004 574 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 TNFRSF4P43489 277 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ARHGDIAP52565 204 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SLC7A2P52569 658 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SMSP52788 366 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ATXN3P54252 364 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 MFAP2P55001 183 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 CLDN6P56747 220 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 LYZP61626 148 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 KCNJ2P63252 427 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 IGLV3-21P80748 117 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 MORF4L2Q15014 288 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ZNF77Q15935 545 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 SGCBQ16585 318 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 HAGHQ16775 308 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 PPP1R3AQ16821 1122 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 PARP6Q2NL67 630 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 TTC31Q49AM3 519 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 ACSBG2Q5FVE4 666 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ACER2Q5QJU3 275 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 N4BP2L1Q5TBK1 243 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 AGBL2Q5U5Z8 902 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 STEAP4Q687X5 459 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 STEAP1BQ6NZ63 245 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 LRRC8BQ6P9F7 803 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 IYDQ6PHW0 289 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 FAM151BQ6UXP7 276 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 APOOLQ6UXV4 268 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 CYHR1Q6ZMK1 362 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 Q6ZS52 159 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 C10orf107Q8IVU9 208 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 CDKL3Q8IVW4 592 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 CENPLQ8N0S6 344 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 CLEC4FQ8N1N0 589 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 C11orf42Q8N5U0 333 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 RELL2Q8NC24 303 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 CCL4L1Q8NHW4 92 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 RDH11Q8TC12 318 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 PYROXD1Q8WU10 500 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 GTSF1Q8WW33 167 aa2.1□□□□□ -2.07
RIF1-212ENST00000498041 ZNF75CPQ92670 426 aaPredicted RBP2.1□□□□□ -2.07
RIF1-212ENST00000498041 BCL2L2Q92843 193 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms