RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IL1RL1Q01638 556 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 SMARCB1Q12824 385 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 MARCH8Q5T0T0 291 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 HSDL2Q6YN16 418 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 NLRP9Q7RTR0 991 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 HMGN2P46Q86SG4 172 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 ZNF573Q86YE8 665 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 CCDC50Q8IVM0 306 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 OR10T2Q8NGX3 314 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 OR2G3Q8NGZ4 309 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 OR1F12Q8NHA8 337 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 LINC00477Q96M19 166 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 MRPL45Q9BRJ2 306 aaKnown RBP1.8□□□□□ -2.12
SMC4-227ENST00000497984 REEP4Q9H6H4 257 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 PCYOX1Q9UHG3 505 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 ODF2LQ9ULJ1 636 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 ZNF835Q9Y2P0 537 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 KIF3AQ9Y496 699 aa1.8□□□□□ -2.12
SMC4-227ENST00000497984 IGLV2-18A0A075B6J9 118 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 NSG1A0A0A6YYJ2 146 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 A8MUI8 341 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 C12orf77C9JDV5 145 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 AP2A1O95782 977 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 MMP11P24347 488 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 IL12AP29459 219 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 GYG1P46976 350 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 GPM6AP51674 278 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 RSPO1Q2MKA7 263 aaPredicted RBP1.79□□□□□ -2.12
SMC4-227ENST00000497984 CARD16Q5EG05 197 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 C1orf220Q5T0J3 134 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 NCR3LG1Q68D85 454 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 OR52E8Q6IFG1 317 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 NANOGP8Q6NSW7 305 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 ZSCAN25Q6NSZ9 544 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 BLOC1S2Q6QNY1 142 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 AFTPHQ6ULP2 937 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 ISLR2Q6UXK2 745 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 GRAMD2AQ8IUY3 354 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 ZNF547Q8IVP9 402 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 SLC35F2Q8IXU6 374 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 ARL10Q8N8L6 244 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 VN1R2Q8NFZ6 395 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 CCDC110Q8TBZ0 833 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 FGF14Q92915 247 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 CMTM7Q96FZ5 175 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 EDEM2Q9BV94 578 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 DNTTIP1Q9H147 329 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 RBKSQ9H477 322 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 ZNF430Q9H8G1 570 aaPredicted RBP1.79□□□□□ -2.12
SMC4-227ENST00000497984 POLE3Q9NRF9 147 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 KCNIP1Q9NZI2 227 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 PCSK1NQ9UHG2 260 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 RPH3ALQ9UNE2 315 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 HEBP2Q9Y5Z4 205 aa1.79□□□□□ -2.12
SMC4-227ENST00000497984 PLAC8L1A1L4L8 177 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 LRP5LA4QPB2 252 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 TM7SF2O76062 418 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 RHOXF2BP0C7M4 288 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 IGHV3-43DP0DP04 118 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 PNMTP11086 282 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 MUC1P15941 1255 aaPredicted RBP1.78□□□□□ -2.12
SMC4-227ENST00000497984 MDH1P40925 334 aaKnown RBP1.78□□□□□ -2.12
SMC4-227ENST00000497984 VGLL4Q14135 290 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 GANABQ14697 944 aaKnown RBP1.78□□□□□ -2.12
SMC4-227ENST00000497984 SF3A2Q15428 464 aaKnown RBP1.78□□□□□ -2.12
SMC4-227ENST00000497984 SLC15A2Q16348 729 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 SGCAQ16586 387 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 TPD52L1Q16890 204 aaPredicted RBP1.78□□□□□ -2.12
SMC4-227ENST00000497984 ZNF836Q6ZNA1 936 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 Q6ZR03 302 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 PGAP1Q75T13 922 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 ZNF546Q86UE3 836 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 FAM86B1Q8N7N1 296 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 OR4D5Q8NGN0 318 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 ZFP90Q8TF47 636 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 OSTF1Q92882 214 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 PELI1Q96FA3 418 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 BMFQ96LC9 184 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 NDFIP1Q9BT67 221 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 OSBPL11Q9BXB4 747 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 ACTR6Q9GZN1 396 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 ING2Q9H160 280 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 LINC00597Q9H2U6 94 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 CLMPQ9H6B4 373 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 ELOVL3Q9HB03 270 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 CTPS2Q9NRF8 586 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 TAS2R3Q9NYW6 316 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 SEC14L3Q9UDX4 400 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 TMCO1Q9UM00 188 aa1.78□□□□□ -2.12
SMC4-227ENST00000497984 LRP4O75096 1905 aa1.78□□□□□ -2.13
SMC4-227ENST00000497984 H3BNH8 94 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 XKRYO14609 159 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 CD5LO43866 347 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 IDH1O75874 414 aaKnown RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 DIRAS3O95661 229 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 BGLAPP02818 100 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 KRT8P05787 483 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 SMIM10L1P0DMW3 83 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 GCAP28676 217 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 PPT1P50897 306 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms