RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CADP27708 2225 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 ELOA3DA6NLF2 546 aaPredicted RBP13.54□□□□□ -0.24
NUP50-219ENST00000497960 SMPD2O60906 423 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 AKR7A3O95154 331 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 AHSA1O95433 338 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 IGHV3-9P01782 118 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 COX5AP20674 150 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 ATP6V1B2P21281 511 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 IGHV1-2P23083 117 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 SELENOWP63302 87 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 TRIM25Q14258 630 aaKnown RBP13.54□□□□□ -0.24
NUP50-219ENST00000497960 ELOA3BQ3SY89 546 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 CASP12Q6UXS9 341 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 VTCN1Q7Z7D3 282 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 ATG4DQ86TL0 474 aaPredicted RBP13.54□□□□□ -0.24
NUP50-219ENST00000497960 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 TMEM99Q8N816 258 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 ELOA3Q8NG57 546 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 OR6T1Q8NGN1 323 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 RNF217Q8TC41 542 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 STK35Q8TDR2 534 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 GEMIN6Q8WXD5 167 aaKnown RBP13.54□□□□□ -0.24
NUP50-219ENST00000497960 LRGUKQ96M69 825 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 MCHR1Q99705 422 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 SF3B5Q9BWJ5 86 aaKnown RBP13.54□□□□□ -0.24
NUP50-219ENST00000497960 ESRP2Q9H6T0 727 aaKnown RBP13.54□□□□□ -0.24
NUP50-219ENST00000497960 ASB6Q9NWX5 421 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 SELENONQ9NZV5 590 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 FLVCR1Q9Y5Y0 555 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 ACANP16112 2415 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 CELSR1Q9NYQ6 3014 aa13.54□□□□□ -0.24
NUP50-219ENST00000497960 CIB4A0PJX0 185 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 CPSF4LA6NMK7 179 aaKnown RBP13.53□□□□□ -0.24
NUP50-219ENST00000497960 GSC2O15499 205 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 ARHGEF9O43307 516 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 CD3EP07766 207 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 HTR2AP28223 471 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 OR1E2P47887 323 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 ADAM8P78325 824 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 PPA1Q15181 289 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 NPTX1Q15818 432 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 MTX3Q5HYI7 312 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 TIMM23BQ5SRD1 257 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 TMEM225Q6GV28 225 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 DHFR2Q86XF0 187 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 P3H2Q8IVL5 708 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 ZNF433Q8N7K0 673 aaPredicted RBP13.53□□□□□ -0.24
NUP50-219ENST00000497960 OR4D11Q8NGI4 311 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 DNAJA4Q8WW22 397 aaPredicted RBP13.53□□□□□ -0.24
NUP50-219ENST00000497960 WFDC6Q9BQY6 131 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 TMEM204Q9BSN7 226 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 TRIM2Q9C040 744 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 TMEM27Q9HBJ8 222 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 DCAF13Q9NV06 445 aaKnown RBP13.53□□□□□ -0.24
NUP50-219ENST00000497960 UPB1Q9UBR1 384 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 AKAP9Q99996 3911 aa13.53□□□□□ -0.24
NUP50-219ENST00000497960 C2CD3Q4AC94 2353 aa13.52□□□□□ -0.24
NUP50-219ENST00000497960 AQP7P3A6NL99 342 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 TMEM229AB2RXF0 380 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 HS3ST1O14792 307 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 CLOCKO15516 846 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 FMO6PO60774 539 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 NPIPB7O75200 414 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 VAMP5O95183 116 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 PLAUP00749 431 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 IFNW1P05000 195 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 GTF2E2P29084 291 aaKnown RBP13.52□□□□□ -0.25
NUP50-219ENST00000497960 NTF4P34130 210 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 NKX6-1P78426 367 aaPredicted RBP13.52□□□□□ -0.25
NUP50-219ENST00000497960 FAPQ12884 760 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 FLOT2Q14254 428 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 OR1Q1Q15612 314 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 ENTPD8Q5MY95 495 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 SHEQ5VZ18 495 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.25
NUP50-219ENST00000497960 RBM45Q8IUH3 476 aaKnown RBP13.52□□□□□ -0.25
NUP50-219ENST00000497960 LRRC75A-AS1Q8N1F1 130 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 LSMEM1Q8N8F7 131 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 OR9K2Q8NGE7 335 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 MFSD8Q8NHS3 518 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 TMEM45BQ96B21 275 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 MMADHCQ9H3L0 296 aaPredicted RBP13.52□□□□□ -0.25
NUP50-219ENST00000497960 C12orf10Q9HB07 376 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 TAS2R16Q9NYV7 291 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 MALT1Q9UDY8 824 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 USF3Q68DE3 2245 aa13.52□□□□□ -0.25
NUP50-219ENST00000497960 A0A1B0GWA3 101 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 OR5H1A6NKK0 313 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 RAD51DO75771 328 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 CIB2O75838 187 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 PNMTP11086 282 aa13.51□□□□□ -0.25
NUP50-219ENST00000497960 HOXC12P31275 282 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms