RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 NR4A3Q92570 626 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 CNOT9Q92600 299 aaKnown RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 NTNG2Q96CW9 530 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 VMP1Q96GC9 406 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 PRRC1Q96M27 445 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 LPAR4Q99677 370 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 ANKRD60Q9BZ19 345 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 RTN4RQ9BZR6 473 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 POLR2J2Q9GZM3 115 aaKnown RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 MS4A7Q9GZW8 240 aaPredicted RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 POLR2J3Q9H1A7 115 aaKnown RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 VCXQ9H320 206 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 ANKRD19PQ9H560 264 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 TRIM45Q9H8W5 580 aaPredicted RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 ZMAT3Q9HA38 289 aaKnown RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 MMP25Q9NPA2 562 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 UBQLN4Q9NRR5 601 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 SMPD3Q9NY59 655 aaPredicted RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 UBAP1Q9NZ09 502 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 FLRT3Q9NZU0 649 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 PDP1Q9P0J1 537 aaPredicted RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 RHCGQ9UBD6 479 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 COPS7AQ9UBW8 275 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 LPAR3Q9UBY5 353 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 C19orf25Q9UFG5 118 aaPredicted RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 PTRH2Q9Y3E5 179 aaKnown RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 FAM32AQ9Y421 112 aaKnown RBP4.85□□□□□ -1.63
GGPS1-208ENST00000497327 OR10H1Q9Y4A9 318 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 WDFY4Q6ZS81 3184 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 USP34Q70CQ2 3546 aa4.85□□□□□ -1.63
GGPS1-208ENST00000497327 WDR87Q6ZQQ6 2873 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF292O60281 2723 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 CEP250Q9BV73 2442 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 NUP210LQ5VU65 1888 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 A0A087WUU8 490 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 TRBV11-1A0A0K0K1C0 115 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 A0A1W2PQD3 144 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 SH3PXD2BA1X283 911 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 OR6C70A6NIJ9 312 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 C21orf140B9A014 251 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 FAAHO00519 579 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 RAD1O60671 282 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 UGT2B11O75310 529 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ZFAND5O76080 213 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 CCNB2O95067 398 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 UTS2O95399 124 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 OXSR1O95747 527 aaPredicted RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 H1F0P07305 194 aaKnown RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 GNAO1P09471 354 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 THRBP10828 461 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ANXA8P13928 327 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 NAGAP17050 411 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 TCN2P20062 427 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 MYF6P23409 242 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ABCD3P28288 659 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 CAPGP40121 348 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ARHGDIAP52565 204 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 PNLIPRP2P54317 469 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 RGS8P57771 180 aaPredicted RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 SMIM11AP58511 58 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 EPS8Q12929 822 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 MED21Q13503 144 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 GANABQ14697 944 aaKnown RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 CD226Q15762 336 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 RFX4Q33E94 735 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 C4orf46Q504U0 113 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ENTPD8Q5MY95 495 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 PLAG1Q6DJT9 500 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 PODNL1Q6PEZ8 512 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 UGT2A3Q6UWM9 527 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 C16orf47Q6ZP98 133 aaPredicted RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ZER1Q7Z7L7 766 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 MARCH9Q86YJ5 346 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 PARP8Q8N3A8 854 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 DHRSXQ8N5I4 330 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 LSMEM1Q8N8F7 131 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 POGLUT1Q8NBL1 392 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 OR5L2Q8NGL0 311 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 OR52J3Q8NH60 311 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 HGDQ93099 445 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 EFHD2Q96C19 240 aaPredicted RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF524Q96C55 264 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 OMA1Q96E52 524 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 NR1H4Q96RI1 486 aaPredicted RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 SIGLEC11Q96RL6 698 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 GAL3ST4Q96RP7 486 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 FEVQ99581 238 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 PITX2Q99697 317 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 MCHR1Q99705 422 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 PRSS27Q9BQR3 290 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ZNF426Q9BUY5 554 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 FNDC11Q9BVV2 318 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 DGCR6LQ9BY27 220 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 GABARAPL3Q9BY60 117 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 POLR1BQ9H9Y6 1135 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 LIN28AQ9H9Z2 209 aaKnown RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 ASCL3Q9NQ33 180 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 EXOSC3Q9NQT5 275 aaKnown RBP4.84□□□□□ -1.63
GGPS1-208ENST00000497327 FAM118AQ9NWS6 357 aa4.84□□□□□ -1.63
GGPS1-208ENST00000497327 KLHL28Q9NXS3 571 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms