RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 ZFC3H1O60293 1989 aaKnown RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 ICE1Q9Y2F5 2266 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 RP1L1Q8IWN7 2480 aaPredicted RBP3.41□□□□□ -1.86
MDM2-220ENST00000496959 CELSR3Q9NYQ7 3312 aa3.41□□□□□ -1.86
MDM2-220ENST00000496959 NBEAQ8NFP9 2946 aa3.4□□□□□ -1.86
MDM2-220ENST00000496959 NBASA2RRP1 2371 aa3.4□□□□□ -1.86
MDM2-220ENST00000496959 ESPL1Q14674 2120 aa3.4□□□□□ -1.86
MDM2-220ENST00000496959 A0A0A6YYC8 382 aaPredicted RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 I3L1I5 382 aaPredicted RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 M0QYV0 167 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 KPNA3O00505 521 aaPredicted RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 CHEK1O14757 476 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 SLC31A1O15431 190 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CFLARO15519 480 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 MED7O43513 233 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 RTN2O75298 545 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CLDN11O75508 207 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 GSTA1P08263 222 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 IGHV1-2P23083 117 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CCR1P32246 355 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 UGT1A5P35504 534 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 PPP1R2P41236 205 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 OR3A4PP47883 348 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CDH4P55283 916 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CLDN6P56747 220 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 BNIP1Q12981 228 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CUL2Q13617 745 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 GK2Q14410 553 aaPredicted RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 CDKN3Q16667 212 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 SDK2Q58EX2 2172 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 PIP5KL1Q5T9C9 394 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 PRAMEF8Q5VWM4 474 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 SPOPLQ6IQ16 392 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 GUSBP11Q6P575 273 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 Q6ZSR6 202 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 SETD3Q86TU7 594 aaPredicted RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 ERI1Q8IV48 349 aaKnown RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 MCOLN2Q8IZK6 566 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 DCAF4L2Q8NA75 395 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 LINC00301Q8NCQ3 95 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 LMX1AQ8TE12 382 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 KIAA1143Q96AT1 154 aaPredicted RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 TSG101Q99816 390 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 SLC17A9Q9BYT1 436 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 TRIM4Q9C037 500 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 TSPYL1Q9H0U9 437 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 SYNDIG1Q9H7V2 258 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 POPDC2Q9HBU9 364 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 RAB20Q9NX57 234 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CFAP45Q9UL16 551 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 LIPT1Q9Y234 373 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 MRPS2Q9Y399 296 aaKnown RBP3.4□□□□□ -1.87
MDM2-220ENST00000496959 LRRK2Q5S007 2527 aa3.4□□□□□ -1.87
MDM2-220ENST00000496959 CACNA1DQ01668 2161 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 ANKRD36A6QL64 1941 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 CETN3O15182 167 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 POLR2DO15514 142 aaKnown RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 HSF2BPO75031 334 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 IGHV3-23P01764 117 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 GIMD1P0DJR0 217 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 ADRB3P13945 408 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 CTSEP14091 401 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 FERP16591 822 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 UGT1A3P35503 534 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 GCLMP48507 274 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 STK19P49842 368 aaPredicted RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 SGSHP51688 502 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 PFN3P60673 137 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 STX1BP61266 288 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 RPS24P62847 133 aaKnown RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 RAD51Q06609 339 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 ELP6Q0PNE2 266 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 FZD2Q14332 565 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 DEFB133Q30KQ1 61 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 LINC00303Q3SY05 128 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 BRMS1LQ5PSV4 323 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 C22orf39Q6P5X5 142 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 C11orf88Q6PI97 169 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 CLEC18BQ6UXF7 455 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 LRRC31Q6UY01 552 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 TSEN54Q7Z6J9 526 aaKnown RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 WFDC5Q8TCV5 224 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 DQX1Q8TE96 717 aaKnown RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 LHX4Q969G2 390 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 FAM104AQ969W3 186 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 SLC25A38Q96DW6 304 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 RPRD1AQ96P16 312 aaPredicted RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 DDA1Q9BW61 102 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 THAP9Q9H5L6 903 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 ZWILCHQ9H900 591 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 AKIRIN1Q9H9L7 192 aaPredicted RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 GRPEL1Q9HAV7 217 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 EXOSC3Q9NQT5 275 aaKnown RBP3.39□□□□□ -1.87
MDM2-220ENST00000496959 RMND1Q9NWS8 449 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 CNIH4Q9P003 139 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 PISDQ9UG56 409 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 APPL1Q9UKG1 709 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 STAP1Q9ULZ2 295 aa3.39□□□□□ -1.87
MDM2-220ENST00000496959 HPCAL4Q9UM19 191 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms