RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 GREM2Q9H772 168 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC2A9Q9NRM0 540 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 THSD1Q9NS62 852 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 GKN1Q9NS71 199 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM207AQ9NSI2 230 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM49BQ9NUQ9 324 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC2A8Q9NY64 477 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FBXW11Q9UKB1 542 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NPIPA1Q9UND3 350 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM184BQ9Y519 407 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ENTPD2Q9Y5L3 495 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 BIVM-ERCC5R4GMW8 1640 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CFAP74Q9C0B2 1584 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MAGI3Q5TCQ9 1506 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MBD5Q9P267 1494 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CEMIPQ8WUJ3 1361 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SMCO3A2RU48 225 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 GAGE10A6NGK3 116 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SAC3D1A6NKF1 404 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM74A7A6NL05 159 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 P2RY10O00398 339 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MRASO14807 208 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 KLF11O14901 512 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CTDSPLO15194 276 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MAGEB4O15481 346 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PLRG1O43660 514 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 XPNPEP2O43895 674 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4F21O95013 312 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CNIH1O95406 144 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ACTL6AO96019 429 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PDYNP01213 254 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CXCL10P02778 98 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MT-ND1P03886 318 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MMP1P03956 469 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ARG1P05089 322 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ALPLP05186 524 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ICAM1P05362 532 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 C1GALT1C1LP0DN25 315 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 COX7A2P14406 83 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF182P17025 639 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TPSB2P20231 275 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CXCR1P25024 350 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 S100A2P29034 98 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 S100GP29377 79 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CALCRP30988 508 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 WASP42768 502 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RFX3P48380 749 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB25P57735 213 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HSD11B2P80365 405 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HMGCS1Q01581 520 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PLA2G7Q13093 441 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SF3A2Q15428 464 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TPSAB1Q15661 275 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SPDYE7PQ495Y7 208 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM74A3Q4VXF1 159 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 EIPR1Q53HC9 387 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OGFRL1Q5TC84 451 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4F3Q6IEY1 312 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM45BPQ6NSW5 357 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM179Q6ZVK1 233 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TCF24Q7RTU0 167 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 NAA40Q86UY6 237 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SNX29P2Q8IUI4 249 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 BAP18Q8IXM2 172 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC44A3Q8N4M1 653 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 C2orf73Q8N5S3 287 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HORMAD2Q8N7B1 307 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR5L1Q8NGL2 311 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OR2T11Q8NH01 316 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PHF10Q8WUB8 498 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CCDC107Q8WV48 283 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC7A6Q92536 515 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 OSTF1Q92882 214 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PRR11Q96HE9 360 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HYLS1Q96M11 299 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 EPYCQ99645 322 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 RSG1Q9BU20 258 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SIK2Q9H0K1 926 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PPP1R3EQ9H7J1 279 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PTGES2Q9H7Z7 377 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SRD5A3Q9H8P0 318 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 WFDC1Q9HC57 220 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 DNAJC4Q9NNZ3 241 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 LIN7CQ9NUP9 197 aaKnown RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 C2orf42Q9NWW7 574 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 MTMR10Q9NXD2 777 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 FOXJ2Q9P0K8 574 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HCN3Q9P1Z3 774 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM181Q9P2C4 612 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC17A6Q9P2U8 582 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CD84Q9UIB8 345 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PLAGL1Q9UM63 463 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 USP22Q9UPT9 525 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 HSPB11Q9Y547 144 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 LRRC7Q96NW7 1537 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 PRXQ9BXM0 1461 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 CDC42BPAQ5VT25 1732 aa2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 TP53BP1Q12888 1972 aaPredicted RBP2.83□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF142P52746 1687 aaPredicted RBP2.82□□□□□ -1.96
SNRNP48-202ENST00000496946 ASTN1O14525 1302 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms