RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 NCKAP5O14513 1909 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 C11orf98E9PRG8 122 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 TRAPPC6AO75865 159 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 IGF2P01344 180 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 ERVK-25P63136 954 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 RPL18Q07020 188 aaKnown RBP15.22■□□□□ 0.03
LMNA-216ENST00000496738 SF3B4Q15427 424 aaKnown RBP eCLIP15.22■□□□□ 0.034e-7■■■■□ 23.7
LMNA-216ENST00000496738 GLYR1Q49A26 553 aaPredicted RBP15.22■□□□□ 0.03
LMNA-216ENST00000496738 C3orf33Q6P1S2 294 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 GHDCQ8N2G8 530 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 CENPSQ8N2Z9 138 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 SMPDL3BQ92485 455 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 FAM173AQ9BQD7 235 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 PRRG3Q9BZD7 231 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 MED20Q9H944 212 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 RYDENQ9NUL5 291 aaKnown RBP15.22■□□□□ 0.03
LMNA-216ENST00000496738 HIF3AQ9Y2N7 669 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 TPRKBQ9Y3C4 175 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 KCNMB2Q9Y691 235 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 A0A1W2PNR3 127 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 GDF1P27539 372 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 GRK5P34947 590 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 EFNB1P98172 346 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 CDONQ4KMG0 1287 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 ALG10Q5BKT4 473 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 MAMDC2Q7Z304 686 aaPredicted RBP15.22■□□□□ 0.03
LMNA-216ENST00000496738 GALNTL5Q7Z4T8 443 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 MDS2Q8NDY4 140 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 BBS1Q8NFJ9 593 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 OR14L1PQ8NHC6 308 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 TRUB1Q8WWH5 349 aaKnown RBP15.22■□□□□ 0.03
LMNA-216ENST00000496738 LIPHQ8WWY8 451 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 OR5B2Q96R09 309 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 KATNB1Q9BVA0 655 aa15.22■□□□□ 0.03
LMNA-216ENST00000496738 A0A087WZY1 265 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 M0R082 166 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 ZNF208O43345 1280 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 TMCC2O75069 709 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 PLGP00747 810 aaPredicted RBP15.21■□□□□ 0.03
LMNA-216ENST00000496738 UQCRC1P31930 480 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 EIF1P41567 113 aaKnown RBP15.21■□□□□ 0.03
LMNA-216ENST00000496738 CXCR4P61073 352 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 CD300CQ08708 224 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 FOXO1Q12778 655 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 SLC38A6Q8IZM9 456 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 GTPBP8Q8N3Z3 284 aaPredicted RBP15.21■□□□□ 0.03
LMNA-216ENST00000496738 CYB561A3Q8NBI2 242 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 ZNF417Q8TAU3 575 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 ZNF582Q96NG8 517 aaPredicted RBP15.21■□□□□ 0.03
LMNA-216ENST00000496738 ZNF587Q96SQ5 575 aaPredicted RBP15.21■□□□□ 0.03
LMNA-216ENST00000496738 ZFP64Q9NPA5 681 aa15.21■□□□□ 0.03
LMNA-216ENST00000496738 OR2M5A3KFT3 312 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 FAM166BA8MTA8 275 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 CRYZL1O95825 349 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 HMGN1P05114 100 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 SP1P08047 785 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 AHCYP23526 432 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 IDUAP35475 653 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 GABARAPL2P60520 117 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 PRPS1P60891 318 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 MVKQ03426 396 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 MYBPHQ13203 477 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 TMEM176BQ3YBM2 270 aaPredicted RBP15.21■□□□□ 0.02
LMNA-216ENST00000496738 WIPI1Q5MNZ9 446 aaPredicted RBP15.21■□□□□ 0.02
LMNA-216ENST00000496738 PLBD1Q6P4A8 553 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 ZNF773Q6PK81 442 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 KDM8Q8N371 416 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 FAM26EQ8N5C1 309 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 GGHQ92820 318 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 RASD2Q96D21 266 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 DCBLD2Q96PD2 775 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 SIAEQ9HAT2 523 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 HINT3Q9NQE9 182 aaKnown RBP15.21■□□□□ 0.02
LMNA-216ENST00000496738 BOKQ9UMX3 212 aaPredicted RBP15.21■□□□□ 0.02
LMNA-216ENST00000496738 CEPT1Q9Y6K0 416 aa15.21■□□□□ 0.02
LMNA-216ENST00000496738 FTCDNL1E5RQL4 147 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 MT-ATP6P00846 226 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 ADORA3P0DMS8 318 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 CTXN1P60606 82 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 SLC35A2P78381 396 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 SELENBP1Q13228 472 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 PMS2P3Q13401 168 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.2■□□□□ 0.028e-9■■■■□ 20.1
LMNA-216ENST00000496738 SLC25A25Q6KCM7 469 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 CPOQ8IVL8 374 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 FAM83FQ8NEG4 500 aaPredicted RBP15.2■□□□□ 0.02
LMNA-216ENST00000496738 OR5J2Q8NH18 312 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 OR4K13Q8NH42 304 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 BORCS5Q969J3 196 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 TAPBPLQ9BX59 468 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 HCAR1Q9BXC0 346 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 ASPNQ9BXN1 380 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 TAS2R5Q9NYW4 299 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 PSORS1C1Q9UIG5 152 aa15.2■□□□□ 0.02
LMNA-216ENST00000496738 LINC00854A0A1B0GVQ3 168 aa15.19■□□□□ 0.02
LMNA-216ENST00000496738 OR2T1O43869 369 aa15.19■□□□□ 0.02
LMNA-216ENST00000496738 APOL3O95236 402 aa15.19■□□□□ 0.02
LMNA-216ENST00000496738 HIST1H1CP16403 213 aaKnown RBP15.19■□□□□ 0.02
LMNA-216ENST00000496738 GTF2E2P29084 291 aaKnown RBP15.19■□□□□ 0.02
LMNA-216ENST00000496738 SRD5A2P31213 254 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms