RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 HGFACQ04756 655 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 SNTB2Q13425 540 aaKnown RBP8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 WHAMMP3Q1A5X7 153 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 FRG2Q64ET8 278 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 LETMD1Q6P1Q0 360 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 FIP1L1Q6UN15 594 aaKnown RBP8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 CPLX4Q7Z7G2 160 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 GPR151Q8TDV0 419 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 PIK3R3Q92569 461 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 RNF125Q96EQ8 232 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 FRG2BQ96QU4 278 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 MRI1Q9BV20 369 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 RHOJQ9H4E5 214 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 SSU72Q9NP77 194 aaKnown RBP8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 UBQLN4Q9NRR5 601 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC7A10Q9NS82 523 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 PNPOQ9NVS9 261 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 PARPBPQ9NWS1 579 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 CPSF2Q9P2I0 782 aaKnown RBP8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 ACOT9Q9Y305 439 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 REXO2Q9Y3B8 237 aaKnown RBP8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 AUP1Q9Y679 476 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 CAPN6Q9Y6Q1 641 aa8.19□□□□□ -1.1
SMARCAL1-213ENST00000496037 A0A1W2PQD3 144 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 EBAG9O00559 213 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 HOXA3O43365 443 aaPredicted RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 RP2O75695 350 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 CLPXO76031 633 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 WISP3O95389 354 aaPredicted RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 H6PDO95479 791 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 IL3P08700 152 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 RPS2P15880 293 aaKnown RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 PRKCAP17252 672 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 TIA1P31483 386 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 NCBP2P52298 156 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 SEC24CP53992 1094 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 ZNF117Q03924 483 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 ILF2Q12905 390 aaKnown RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 GTF2H2Q13888 395 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 CASP8Q14790 479 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 CD226Q15762 336 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 TBRG1Q3YBR2 411 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 VPS26BQ4G0F5 336 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 KLF17Q5JT82 389 aaPredicted RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 ATPAF1Q5TC12 328 aaPredicted RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 GTF2H2CQ6P1K8 395 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 ABHD12BQ7Z5M8 362 aaPredicted RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 L3MBTL4Q8NA19 623 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 DEFB108BQ8NET1 73 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 PHOSPHO1Q8TCT1 267 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 PRPF18Q99633 342 aaKnown RBP8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 RBBP8Q99708 897 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 SHCBP1LQ9BZQ2 653 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 POFUT1Q9H488 388 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 ELOVL6Q9H5J4 265 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 CAB39LQ9H9S4 337 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC35C2Q9NQQ7 365 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 TNFRSF19Q9NS68 423 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 SLC9A8Q9Y2E8 581 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 DTNAQ9Y4J8 743 aa8.18□□□□□ -1.1
SMARCAL1-213ENST00000496037 PPIAL4EA0A075B759 164 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 PPIAL4CA0A0B4J2A2 164 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 SYCE1LA8MT33 242 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 PPIAL4DF5H284 164 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 UPK1AO00322 258 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 UBE2CO00762 179 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 CDC14BO60729 498 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 FOXH1O75593 365 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 KRT33AO76009 404 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 NCR1O76036 304 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 PSMG1O95456 288 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 IGLV1-44P01699 117 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 JUNP05412 331 aaKnown RBP8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 PPIAL4FP0DN26 164 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 GFAPP14136 432 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 TYK2P29597 1187 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 SDHAP31040 664 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 ALDH3B1P43353 468 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 MAGEA8P43361 318 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 EVX1P49640 407 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 P2RX1P51575 399 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 RPS16P62249 146 aaKnown RBP8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 MGAT5Q09328 741 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 HEPACAMQ14CZ8 416 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 TRADDQ15628 312 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 BAK1Q16611 211 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 SGO1Q5FBB7 561 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 RNASEH2BQ5TBB1 312 aaKnown RBP8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 TSPO2Q5TGU0 170 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 ATG16L1Q676U5 607 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 KRT80Q6KB66 452 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 WDR93Q6P2C0 686 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 TMPPEQ6ZT21 453 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 SZRD1Q7Z422 152 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 GOLGA7Q7Z5G4 137 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 EGFL6Q8IUX8 553 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 OR2L13Q8N349 312 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 GLB1L3Q8NCI6 653 aaPredicted RBP8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 MOSPD2Q8NHP6 518 aa8.17□□□□□ -1.1
SMARCAL1-213ENST00000496037 ST7LQ8TDW4 575 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms