RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	ZNF879	B4DU55	563 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	INMT-MINDY4	F8WBC2	141 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522		H3BMH7	237 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	SOX1	O00570	391 aa	Predicted RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	EEF1E1	O43324	174 aa	Known RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	SDC3	O75056	442 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	SLC6A1	P30531	599 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	SDHA	P31040	664 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	PSMB10	P40306	273 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	CDK10	Q15131	360 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	HSD17B12	Q53GQ0	312 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	UNQ9370/PRO34162	Q6UXP9	181 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	TCTE3	Q8IZS6	198 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ABHD1	Q96SE0	405 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	RPRD1B	Q9NQG5	326 aa	Known RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	RXFP3	Q9NSD7	469 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	CPNE3	O75131	537 aa	Known RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	MTRF1	O75570	445 aa	Known RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	DDAH2	O95865	285 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	IGKV3-11	P04433	115 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ASAH2B	P0C7U1	165 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	SNRPB	P14678	240 aa	Known RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	POU3F3	P20264	500 aa	Predicted RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	MST1	P26927	711 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	UQCRC1	P31930	480 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ARL4D	P49703	201 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	NXPH1	P58417	271 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	CTXN1	P60606	82 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	EGR4	Q05215	589 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	TIGD3	Q6B0B8	471 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	LYPD4	Q6UWN0	246 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	SYT9	Q86SS6	491 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ZNF563	Q8TA94	476 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	RPS4Y2	Q8TD47	263 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ZNF721	Q8TF20	911 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ADIPOR1	Q96A54	375 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ADO	Q96SZ5	270 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	SMAD5	Q99717	465 aa	Known RBP	13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	LAT2	Q9GZY6	243 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	ABCG5	Q9H222	651 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	C12orf10	Q9HB07	376 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	BRD7	Q9NPI1	651 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	MOK	Q9UQ07	419 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	RNF215	Q9Y6U7	377 aa		13.98	□□□□□ -0.17
CALD1-222	ENST00000495522	TRIO	O75962	3097 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522		A0A1B0GVT2	93 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	ANKRD61	A6NGH8	418 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	UBL3	O95164	117 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	TXNDC12	O95881	172 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	ARSB	P15848	533 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	LCN1	P31025	176 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	SLC6A8	P48029	635 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	AGFG1	P52594	562 aa	Known RBP	13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	DCAF7	P61962	342 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	BTG1	P62324	171 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	HSD11B2	P80365	405 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	ELAVL1	Q15717	326 aa	Known RBP	13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	BICRAL	Q6AI39	1079 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	SLC16A9	Q7RTY1	509 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	EXD3	Q8N9H8	876 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	LILRB4	Q8NHJ6	448 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	GAL3ST4	Q96RP7	486 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	LPAR4	Q99677	370 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	CACNG2	Q9Y698	323 aa		13.97	□□□□□ -0.17
CALD1-222	ENST00000495522	PCDH15	Q96QU1	1955 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	FAM171A2	A8MVW0	826 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	ICOSLG	O75144	302 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	TACR3	P29371	465 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	GRPR	P30550	384 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	PITPNA	Q00169	270 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	RPL6	Q02878	288 aa	Known RBP	13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	LTB	Q06643	244 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	PLA1A	Q53H76	456 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	SLC6A19	Q695T7	634 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	SIGIRR	Q6IA17	410 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	BAIAP2L2	Q6UXY1	529 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	NUP54	Q7Z3B4	507 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	SLC35F3	Q8IY50	421 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	CARF	Q8N187	725 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	ASCC1	Q8N9N2	400 aa	Known RBP	13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	UCKL1	Q9NWZ5	548 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	DHCR7	Q9UBM7	475 aa	Known RBP	13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	SPATA2	Q9UM82	520 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	CLEC4A	Q9UMR7	237 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	ZNF281	Q9Y2X9	895 aa		13.96	□□□□□ -0.17
CALD1-222	ENST00000495522	AK6	Q9Y3D8	172 aa	Known RBP	13.96	□□□□□ -0.17
CALD1-222	ENST00000495522		A0A0B4J203	849 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	C4orf47	A7E2U8	309 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	TCEA1	P23193	301 aa	Known RBP	13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	IL12B	P29460	328 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	OR1D5	P58170	312 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	RRAS2	P62070	204 aa	Predicted RBP	13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	UBXN2B	Q14CS0	331 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	YIF1B	Q5BJH7	314 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	EMC4	Q5J8M3	183 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	ZNF684	Q5T5D7	378 aa		13.96	□□□□□ -0.18
CALD1-222	ENST00000495522	KRT74	Q7RTS7	529 aa		13.96	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms