RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ATG16L1Q676U5 607 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 FAM166AQ6J272 317 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 ANKRD16Q6P6B7 361 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 TUBA1AQ71U36 451 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 CROCCP2Q86T23 111 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 ANKS4BQ8N8V4 417 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 VPS33AQ96AX1 596 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 PTDSS2Q9BVG9 487 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 PRR14Q9BWN1 585 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 MOV10Q9HCE1 1003 aaKnown RBP19.2■□□□□ 0.66
HDDC3-203ENST00000494993 KCNS2Q9ULS6 477 aa19.2■□□□□ 0.66
HDDC3-203ENST00000494993 A0A096LPE4 126 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 A0A1W2PPZ6 126 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 LOC390937A0A1W2PQ73 354 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 IGLV1-44P01699 117 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 HOXB1P14653 301 aaPredicted RBP19.19■□□□□ 0.66
HDDC3-203ENST00000494993 SH3BGRP55822 239 aaPredicted RBP19.19■□□□□ 0.66
HDDC3-203ENST00000494993 ROR2Q01974 943 aaKnown RBP19.19■□□□□ 0.66
HDDC3-203ENST00000494993 EGR4Q05215 589 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 EFNB3Q15768 340 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 CARTPTQ16568 116 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 SLC9B1Q4ZJI4 515 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 ZNF311Q5JNZ3 666 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 KDM8Q8N371 416 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 SLC25A36Q96CQ1 311 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 FOXN4Q96NZ1 517 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 PLK3Q9H4B4 646 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 SEC61A2Q9H9S3 476 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 SDR39U1Q9NRG7 319 aaPredicted RBP19.19■□□□□ 0.66
HDDC3-203ENST00000494993 RCE1Q9Y256 329 aa19.19■□□□□ 0.66
HDDC3-203ENST00000494993 IGHV4-61A0A0C4DH41 118 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 LOC100289279A0A1B0GTE1 492 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 TMEM120BA0PK00 339 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 SLC35F4A4IF30 521 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 OR4A8P0C604 315 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 APEHP13798 732 aaKnown RBP19.18■□□□□ 0.66
HDDC3-203ENST00000494993 GTF2E2P29084 291 aaKnown RBP19.18■□□□□ 0.66
HDDC3-203ENST00000494993 CALCRP30988 508 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 THBS2P35442 1172 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 RPS5P46782 204 aaKnown RBP19.18■□□□□ 0.66
HDDC3-203ENST00000494993 POLR2JP52435 117 aaKnown RBP19.18■□□□□ 0.66
HDDC3-203ENST00000494993 CLDN17P56750 224 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 HOXC5Q00444 222 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 C6orf10Q5SRN2 563 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 VHLLQ6RSH7 139 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 FAM169BQ8N8A8 192 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 OR4F15Q8NGB8 312 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 OR9I1Q8NGQ6 314 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 MGARPQ8TDB4 240 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 SLC35B4Q969S0 331 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 MSI2Q96DH6 328 aaKnown RBP19.18■□□□□ 0.66
HDDC3-203ENST00000494993 CHODLQ9H9P2 273 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 RAB21Q9UL25 225 aa19.18■□□□□ 0.66
HDDC3-203ENST00000494993 RPL36A-HNRNPH2H7BZ11 118 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 FZD7O75084 574 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 ZNF432O94892 652 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 IGKV3-15P01624 115 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 NUDT7P0C024 238 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 ZNF43P17038 809 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 SRD5A1P18405 259 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 PPOXP50336 477 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 KRTAP24-1Q3LI83 254 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 MAVSQ7Z434 540 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 ANKK1Q8NFD2 765 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 KTI12Q96EK9 354 aaPredicted RBP19.17■□□□□ 0.66
HDDC3-203ENST00000494993 BCL2L10Q9HD36 194 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 SEC14L4Q9UDX3 406 aa19.17■□□□□ 0.66
HDDC3-203ENST00000494993 UBDO15205 165 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 SLC43A1O75387 559 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 ARF1P84077 181 aaKnown RBP19.16■□□□□ 0.66
HDDC3-203ENST00000494993 RGNQ15493 299 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 IQCCQ4KMZ1 466 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 C6orf89Q6UWU4 347 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 IL17RELQ6ZVW7 336 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 MYPOPQ86VE0 399 aaPredicted RBP19.16■□□□□ 0.66
HDDC3-203ENST00000494993 NUP37Q8NFH4 326 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 BBS10Q8TAM1 723 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 GTF2H4Q92759 462 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 OXGR1Q96P68 337 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 OR52B2Q96RD2 323 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 PAIP1Q9H074 479 aaKnown RBP19.16■□□□□ 0.66
HDDC3-203ENST00000494993 RAD21L1Q9H4I0 556 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 A4GALTQ9NPC4 353 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 B3GAT1Q9P2W7 334 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 RPS6KB2Q9UBS0 482 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 PCDHB14Q9Y5E9 798 aa19.16■□□□□ 0.66
HDDC3-203ENST00000494993 CELA3BP08861 270 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 BMP2P12643 396 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 CBR1P16152 277 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 ZNF23P17027 643 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 IDH3GP51553 393 aaPredicted RBP19.15■□□□□ 0.66
HDDC3-203ENST00000494993 HGFACQ04756 655 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 FADDQ13158 208 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 FAM120AOSQ5T036 256 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 MIER2Q8N344 545 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 ZNF540Q8NDQ6 660 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 MAL2Q969L2 176 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 BPESC1Q9GZL8 116 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 RAB1BQ9H0U4 201 aa19.15■□□□□ 0.66
HDDC3-203ENST00000494993 ZNF442Q9H7R0 627 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms