RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ESCO2Q56NI9 601 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 LRRN1Q6UXK5 716 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 GDPGP1Q6ZNW5 385 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 RAPH1Q70E73 1250 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 CREG2Q8IUH2 290 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 SPICQ8N5J4 248 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 OR4F6Q8NGB9 312 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 TMEM234Q8WY98 164 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 CFHR4Q92496 578 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 MS4A4EQ96PG1 132 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 CCDC106Q9BWC9 280 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 BTBD2Q9BX70 525 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 TRIM31Q9BZY9 425 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 PATZ1Q9HBE1 687 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 MIEF1Q9NQG6 463 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 RPUSD1Q9UJJ7 312 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 NFU1Q9UMS0 254 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 FOXJ3Q9UPW0 622 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 TNPO3Q9Y5L0 923 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 SAR1BQ9Y6B6 198 aa12.16□□□□□ -0.46
CHMP2B-205ENST00000494980 TSPAN9O75954 239 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 IGHV2-70P01814 119 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 F13BP05160 661 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 IFI6P09912 130 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 SPRP35270 261 aaPredicted RBP12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 MSX2P35548 267 aaPredicted RBP12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 KLF3P57682 345 aaPredicted RBP12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 PAX2Q02962 417 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 SLC3A1Q07837 685 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 C2orf80Q0P641 193 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 SKP2Q13309 424 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 CCDC91Q7Z6B0 441 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 CMC1Q7Z7K0 106 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 GPAT4Q86UL3 456 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 KLHL36Q8N4N3 616 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 MGARPQ8TDB4 240 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 NSUN5Q96P11 429 aaKnown RBP12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 HOXD1Q9GZZ0 328 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 CPSF2Q9P2I0 782 aaKnown RBP12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 TRAPPC4Q9Y296 219 aa12.15□□□□□ -0.46
CHMP2B-205ENST00000494980 KIAA1109Q2LD37 5005 aa12.15□□□□□ -0.47
CHMP2B-205ENST00000494980 TCRBV9S1A1TA0A576 114 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 E9PQ18 207 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 DNAJA2O60884 412 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 UBOX5O94941 541 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 HLA-HP01893 362 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 IMPDH2P12268 514 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 CHN1P15882 459 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 ZNF14P17017 642 aaPredicted RBP12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 CCNA2P20248 432 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 CRABP2P29373 138 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 APOBEC1P41238 236 aaKnown RBP12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 PCBP3P57721 371 aaKnown RBP12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 SELENOVP59797 346 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 GRTP1Q5TC63 336 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 C3orf62Q6ZUJ4 267 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 CMIPQ8IY22 773 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 CDS1Q92903 461 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 R3HDM4Q96D70 268 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 CHMP6Q96FZ7 201 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 SERHL2Q9H4I8 314 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 PALMDQ9NP74 551 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 DCAF16Q9NXF7 216 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 SNX6Q9UNH7 406 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 DTNAQ9Y4J8 743 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 NPTNQ9Y639 398 aa12.14□□□□□ -0.47
CHMP2B-205ENST00000494980 IGHV2-70DA0A0C4DH43 119 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 FAM159BA6NKW6 160 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 UROSP10746 265 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 LYL1P12980 280 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 CD33P20138 364 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 SSTR1P30872 391 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 CLK1P49759 484 aaKnown RBP12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 ATP12AP54707 1039 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 BPIFB3P59826 476 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 GLO1Q04760 184 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 ACSM2AQ08AH3 577 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 ZNF763Q0D2J5 394 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 ACSM2BQ68CK6 577 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 LETMD1Q6P1Q0 360 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 NIPAL3Q6P499 406 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 RNF144BQ7Z419 303 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 RHEBL1Q8TAI7 183 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 APIPQ96GX9 242 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 DCLRE1CQ96SD1 692 aaKnown RBP12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 NAPGQ99747 312 aaPredicted RBP12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 CENPHQ9H3R5 247 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 TMEM165Q9HC07 324 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 TAS2R7Q9NYW3 318 aa12.13□□□□□ -0.47
CHMP2B-205ENST00000494980 IGLV3-9A0A075B6K5 115 aa12.12□□□□□ -0.47
CHMP2B-205ENST00000494980 POC1B-GALNT4F8VUJ3 575 aa12.12□□□□□ -0.47
CHMP2B-205ENST00000494980 NPIPB9F8W1W9 429 aa12.12□□□□□ -0.47
CHMP2B-205ENST00000494980 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
CHMP2B-205ENST00000494980 ANKRD28O15084 1053 aa12.12□□□□□ -0.47
CHMP2B-205ENST00000494980 ANXA4P09525 319 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms