RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.12□□□□□ -1.43
MSH5-217ENST00000494458 FOXO1Q12778 655 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 POU4F2Q12837 409 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 MLLT11Q13015 90 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 AIMP2Q13155 320 aaKnown RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 AQP6Q13520 282 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ATP1A4Q13733 1029 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 CRMP1Q14194 572 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 SPHARQ15513 63 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 INPP5JQ15735 1006 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 SSX1Q16384 188 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 TIGD6Q17RP2 521 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 HYAL4Q2M3T9 481 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ALG10Q5BKT4 473 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ARMCX4Q5H9R4 360 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ZNF684Q5T5D7 378 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 LCE2CQ5TA81 110 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 GPR107Q5VW38 600 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 PLBD1Q6P4A8 553 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 CD200R1LQ6Q8B3 271 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 IL20RBQ6UXL0 311 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 GDPGP1Q6ZNW5 385 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 LIAT1Q6ZQX7 453 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 MDGA2Q7Z553 956 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ZBTB46Q86UZ6 589 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 LSRQ86X29 649 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 TMCO5AQ8N6Q1 288 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ARIH2OSQ8N7S6 290 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 PSD4Q8NDX1 1056 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 OR52N1Q8NH53 320 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ZNF519Q8TB69 540 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 SLC25A43Q8WUT9 341 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 TM9SF4Q92544 642 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 NMD3Q96D46 503 aaKnown RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 ARL5BQ96KC2 179 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 OPALINQ96PE5 141 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ERMAPQ96PL5 475 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 MGLLQ99685 303 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 MND1Q9BWT6 205 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 CCDC90BQ9GZT6 254 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 RNF32Q9H0A6 362 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 TXNIPQ9H3M7 391 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 METTL7AQ9H8H3 244 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ADGRL4Q9HBW9 690 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ERVK13-1Q9NX77 482 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 VSX1Q9NZR4 365 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 KLRF1Q9NZS2 232 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 KLHL13Q9P2N7 655 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 MOKQ9UQ07 419 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ERGIC3Q9Y282 383 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 B3GALT5Q9Y2C3 310 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 CAB39Q9Y376 341 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 SF3B6Q9Y3B4 125 aaKnown RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 HDGFL3Q9Y3E1 203 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ADAM18Q9Y3Q7 739 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 IER3IP1Q9Y5U9 82 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 LRRC3CA6NJW4 275 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 FAM183AA6NL82 134 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 MASP2O00187 686 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CCRL2O00421 344 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 SLC22A1O15245 554 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 SEC14L5O43304 696 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 NEURL1O76050 574 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 GLCEO94923 617 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 PMS2P2O95744 297 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CD1AP06126 327 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 LIPCP11150 499 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CPEP16870 476 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 SPI1P17947 270 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CD53P19397 219 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CCNA2P20248 432 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CNR1P21554 472 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 GALP22466 123 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 GRPRP30550 384 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CRYBB2P43320 205 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 RPS5P46782 204 aaKnown RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 CENPAP49450 140 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 SH3BGRP55822 239 aaPredicted RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 WNT4P56705 351 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CTXN1P60606 82 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 FOXF1Q12946 379 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 NFATC3Q12968 1075 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 SELENBP1Q13228 472 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 GALEQ14376 348 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CCDC157Q569K6 752 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 SLC35F1Q5T1Q4 408 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 EEF1A1P5Q5VTE0 462 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 B3GNTL1Q67FW5 361 aaPredicted RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 FCRLBQ6BAA4 426 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 OR5M10Q6IEU7 315 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 PAQR6Q6TCH4 344 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 IGFL2Q6UWQ7 119 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 CCDC81Q6ZN84 652 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 H1FNTQ75WM6 255 aaPredicted RBP6.11□□□□□ -1.43
MSH5-217ENST00000494458 PXKQ7Z7A4 578 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 ADCK1Q86TW2 530 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 P2RY8Q86VZ1 359 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 PHC2Q8IXK0 858 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 TMEM156Q8N614 296 aa6.11□□□□□ -1.43
MSH5-217ENST00000494458 ACBD7Q8N6N7 88 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms