RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 PON3Q15166 354 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 LINGO2Q7L985 606 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 MARCH3Q86UD3 253 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 SLC35F2Q8IXU6 374 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 SLC35F3Q8IY50 421 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 TRIM63Q969Q1 353 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 KTI12Q96EK9 354 aaPredicted RBP11.31□□□□□ -0.6
PHF3-205ENST00000494284 SYNDIG1Q9H7V2 258 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 CUTCQ9NTM9 273 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 CACNG2Q9Y698 323 aa11.31□□□□□ -0.6
PHF3-205ENST00000494284 C11orf98E9PRG8 122 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC19A2O60779 497 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 PRAMEF2O60811 474 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 NUDT14O95848 222 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 FBXO45P0C2W1 286 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 BTCP35070 178 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ATP12AP54707 1039 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 RPS15P62841 145 aaKnown RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 SIRPAP78324 504 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ACSM1Q08AH1 577 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ZNF613Q6PF04 617 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 KDM8Q8N371 416 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC38A9Q8NBW4 561 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 KIAA1143Q96AT1 154 aaPredicted RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 CNN2Q99439 309 aaKnown RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 MARVELD1Q9BSK0 173 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ZNF426Q9BUY5 554 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 NUDT9Q9BW91 350 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 DUSP15Q9H1R2 295 aaPredicted RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 MKKSQ9NPJ1 570 aaPredicted RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC2A4RGQ9NR83 387 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ST6GALNAC2Q9UJ37 374 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 TMEM5Q9Y2B1 443 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC6A5Q9Y345 797 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 CACNA1EQ15878 2313 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ZNF749O43361 778 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 NDUFB2O95178 105 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 IFNGP01579 166 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 AHCYP23526 432 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 CDKN2AP42771 156 aaKnown RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 NR0B1P51843 470 aaKnown RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC37A1P57057 533 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 EGR4Q05215 589 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 CEP78Q5JTW2 689 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 DMKNQ6E0U4 476 aaPredicted RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 ULK3Q6PHR2 472 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 GKN2Q86XP6 184 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 PMEPA1Q969W9 287 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SGTBQ96EQ0 304 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SEMA4CQ9C0C4 833 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 IRF2BPLQ9H1B7 796 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 CHRNA9Q9UGM1 479 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC23A1Q9UHI7 598 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 TEKT2Q9UIF3 430 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 GMEB2Q9UKD1 530 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 PLCL2Q9UPR0 1127 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 FLRT2O43155 660 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SEC14L5O43304 696 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 ZNF354AO60765 605 aaPredicted RBP11.3□□□□□ -0.6
PHF3-205ENST00000494284 TIAF1O95411 115 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 EPXP11678 715 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 PRKCAP17252 672 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SPI1P17947 270 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC6A1P30531 599 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 NSDHLQ15738 373 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 SLC36A2Q495M3 483 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 MANEAQ5SRI9 462 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 DUSP18Q8NEJ0 188 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 AKAP1Q92667 903 aaKnown RBP eCLIP11.3□□□□□ -0.6
PHF3-205ENST00000494284 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 MED28Q9H204 178 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 KCNK15Q9H427 330 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 KLK11Q9UBX7 282 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 IKZF2Q9UKS7 526 aa11.3□□□□□ -0.6
PHF3-205ENST00000494284 NCOR1O75376 2440 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 MEIS3P1A6NDR6 274 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 SCO2O43819 266 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
PHF3-205ENST00000494284 SRPX2O60687 465 aaPredicted RBP11.29□□□□□ -0.6
PHF3-205ENST00000494284 ZFPL1O95159 310 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 MAS1P04201 325 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 ITPKBP27987 946 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 GZMKP49863 264 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 RPS11P62280 158 aaKnown RBP eCLIP11.29□□□□□ -0.6
PHF3-205ENST00000494284 FUT7Q11130 342 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 PLA2G7Q13093 441 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 CCDC58Q4VC31 144 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 LRRC69Q6ZNQ3 347 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 FCRLAQ7L513 359 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 GPALPP1Q8IXQ4 340 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 ZNF595Q8IYB9 648 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 TOR1AIP2Q8NFQ8 470 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 OR11H7Q8NGC8 314 aa11.29□□□□□ -0.6
PHF3-205ENST00000494284 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms