RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RAB6CQ53S08 254 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 H2BFWTQ7Z2G1 175 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 C14orf80Q86SX3 495 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 LGI3Q8N145 548 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 OR52R1Q8NGF1 315 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 OR13C9Q8NGT0 318 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 KIRREL1Q96J84 757 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 CHRDL1Q9BU40 450 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 SELENOIQ9C0D9 397 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 PLEKHF2Q9H8W4 249 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 CBLCQ9ULV8 474 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 VWDEQ8N2E2 1590 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 SETBP1Q9Y6X0 1596 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 TSPOAP1O95153 1857 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-221ENST00000493795 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 G3V3Q6 166 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 LGALS8O00214 317 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 NCR1O76036 304 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 NXPH2O95156 264 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 HNRNPA1P09651 372 aaKnown RBP eCLIP7.33□□□□□ -1.24
BRCA1-221ENST00000493795 GABRB3P28472 473 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 P2RX3P56373 397 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 HTR4Q13639 388 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 COTL1Q14019 142 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 TIGITQ495A1 244 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 TMEM97Q5BJF2 176 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 GRAMD2AQ8IUY3 354 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 MMP21Q8N119 569 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 TFAP2CQ92754 450 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 UCN3Q969E3 161 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 SMIM12Q96EX1 92 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 C20orf24Q9BUV8 137 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 GPR62Q9BZJ7 368 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 OR51I2Q9H344 312 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 PIGMQ9H3S5 423 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 NRIP3Q9NQ35 241 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 AJAP1Q9UKB5 411 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-221ENST00000493795 OR52A1Q9UKL2 312 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 EMC9Q9Y3B6 208 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 ANTXRLA6NF34 631 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 NME4O00746 187 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 IGHEP01854 428 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 GYPBP06028 91 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 HNRNPA2B1P22626 353 aaKnown RBP7.33□□□□□ -1.24
BRCA1-221ENST00000493795 BLVRBP30043 206 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-221ENST00000493795 RFX2P48378 723 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 GATMP50440 423 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 SLC35G1Q2M3R5 365 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 OR8G2PQ6IF36 304 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 SYT9Q86SS6 491 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 OR52B6Q8NGF0 335 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 OR51A4Q8NGJ6 313 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 HLA-CQ95604 372 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 TMIGD2Q96BF3 282 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 SLC29A1Q99808 456 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 SLC12A9Q9BXP2 914 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 CPEB1Q9BZB8 566 aaKnown RBP7.33□□□□□ -1.24
BRCA1-221ENST00000493795 GABRQQ9UN88 632 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 MAGI3Q5TCQ9 1506 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 KDM6BO15054 1643 aa7.33□□□□□ -1.24
BRCA1-221ENST00000493795 ANKUB1A6NFN9 424 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 SGK494L7N484 410 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 PMS2P2O95744 297 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 TRNP1Q6NT89 227 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 OPN5Q6U736 354 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 SLC35D2Q76EJ3 337 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 B3GNT8Q7Z7M8 397 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 THNSL2Q86YJ6 484 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 CISD2Q8N5K1 135 aaKnown RBP7.32□□□□□ -1.24
BRCA1-221ENST00000493795 GLIS1Q8NBF1 620 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ACVR1CQ8NER5 493 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 CLEC4DQ8WXI8 215 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 HSD17B8Q92506 261 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 FOXN4Q96NZ1 517 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 Q9Y3F1 56 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 KLK4Q9Y5K2 254 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ACTL7AQ9Y615 435 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 RAB27BO00194 218 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 GALR3O60755 368 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-221ENST00000493795 SEMA4FO95754 770 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 CFHP08603 1231 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 H2AFB1P0C5Y9 115 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 HCCSP53701 268 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 EDDM3BP56851 147 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 RING1Q06587 406 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 OR5I1Q13606 314 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ENDOGQ14249 297 aaKnown RBP7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ENTPD8Q5MY95 495 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ETFRF1Q6IPR1 90 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 MTMR14Q8NCE2 650 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF566Q969W8 418 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 TMEM59LQ9UK28 342 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 MOKQ9UQ07 419 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 DNAJC15Q9Y5T4 150 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ETV7Q9Y603 341 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 CLDN24A6NM45 220 aa7.32□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF724A8MTY0 619 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms