RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 C9orf40Q8IXQ3 194 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 SYS1Q8N2H4 156 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 MS4A15Q8N5U1 240 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 C10orf53Q8N6V4 93 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 ZBTB44Q8NCP5 570 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 OR2T27Q8NH04 317 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 B4GALNT2Q8NHY0 566 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 FNDC8Q8TC99 324 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 OTULINQ96BN8 352 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 TEAD3Q99594 435 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 CRB3Q9BUF7 120 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 STRADBQ9C0K7 418 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 OR51E2Q9H255 320 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 NRIP3Q9NQ35 241 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 CTSFQ9UBX1 484 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 CHRNA9Q9UGM1 479 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 CLEC2DQ9UHP7 191 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 CARD8Q9Y2G2 431 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 UGT2A1Q9Y4X1 527 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 NPFFR2Q9Y5X5 522 aa9.12□□□□□ -0.95
PRPF3-206ENST00000493553 PI4KAP42356 2102 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 TRAV27A0A087WT01 109 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 IQCMA0A1B0GVH7 501 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 A8MVM7 634 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 FAM47E-STBD1D6RA91 191 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 J3QRE1 110 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 TP53I11O14683 189 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 ICOSLGO75144 302 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 PPP1R3DO95685 299 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 LDOC1O95751 146 aaPredicted RBP9.11□□□□□ -0.95
PRPF3-206ENST00000493553 CD1AP06126 327 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 SBK2P0C263 348 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 NR4A1P22736 598 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 ACP1P24666 158 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 EVI2BP34910 448 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 OPRL1P41146 370 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 CRYBB2P43320 205 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 DIO1P49895 249 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 DLX5P56178 289 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 E2F1Q01094 437 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 ZFP36L1Q07352 338 aaKnown RBP9.11□□□□□ -0.95
PRPF3-206ENST00000493553 GGTLC2Q14390 218 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 INAQ16352 499 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 ZNF74Q16587 644 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 ZNF181Q2M3W8 571 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 KLHL12Q53G59 568 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 LIPKQ5VXJ0 399 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 PAPD4Q6PIY7 484 aaKnown RBP9.11□□□□□ -0.95
PRPF3-206ENST00000493553 TMEM205Q6UW68 189 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 JAZF1Q86VZ6 243 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 MAML2Q8IZL2 1156 aaPredicted RBP9.11□□□□□ -0.95
PRPF3-206ENST00000493553 ZNF485Q8NCK3 441 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 NFAM1Q8NET5 270 aaPredicted RBP9.11□□□□□ -0.95
PRPF3-206ENST00000493553 OR5M3Q8NGP4 307 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 PHYHIPQ92561 330 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 NACC2Q96BF6 587 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 C1GALT1C1Q96EU7 318 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 CEP19Q96LK0 163 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 CNN2Q99439 309 aaKnown RBP9.11□□□□□ -0.95
PRPF3-206ENST00000493553 CTRCQ99895 268 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 ZBTB20Q9HC78 741 aaPredicted RBP9.11□□□□□ -0.95
PRPF3-206ENST00000493553 MMP25Q9NPA2 562 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 SLC22A11Q9NSA0 550 aa9.11□□□□□ -0.95
PRPF3-206ENST00000493553 OR2W5A6NFC9 320 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 HSPB2A8KAH6 182 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 C12orf71A8MTZ7 269 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 CENPBD1B2RD01 187 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 PHYHO14832 338 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 GPX5O75715 221 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 AHSA1O95433 338 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 NUDT14O95848 222 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 RENP00797 406 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 TACSTD2P09758 323 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 SLC2A5P22732 501 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 PTBP1P26599 531 aaKnown RBP eCLIP9.1□□□□□ -0.95
PRPF3-206ENST00000493553 TACR3P29371 465 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 CCKBRP32239 447 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 SOX3P41225 446 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 APOBEC1P41238 236 aaKnown RBP9.1□□□□□ -0.95
PRPF3-206ENST00000493553 GBX2P52951 348 aaPredicted RBP9.1□□□□□ -0.95
PRPF3-206ENST00000493553 FXYD6P3P58550 94 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 DEFA1P59665 94 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 DEFA3P59666 94 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 ZNF117Q03924 483 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 SRSF5Q13243 272 aaKnown RBP9.1□□□□□ -0.95
PRPF3-206ENST00000493553 SNTA1Q13424 505 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 CRMP1Q14194 572 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 CD226Q15762 336 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 HSPB2Q16082 182 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 CCDC58Q4VC31 144 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 ALG10Q5BKT4 473 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 SLC35F1Q5T1Q4 408 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 FAM69AQ5T7M9 428 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 FAM205BPQ63HN1 556 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 MZT2AQ6P582 158 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 BCDIN3DQ7Z5W3 292 aaKnown RBP9.1□□□□□ -0.95
PRPF3-206ENST00000493553 MEX3DQ86XN8 651 aaKnown RBP9.1□□□□□ -0.95
PRPF3-206ENST00000493553 PRSS58Q8IYP2 241 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 ZNF248Q8NDW4 579 aa9.1□□□□□ -0.95
PRPF3-206ENST00000493553 ATP6V1C2Q8NEY4 427 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms