RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PXKQ7Z7A4 578 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 LRRC17Q8N6Y2 441 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 CLDN22Q8N7P3 220 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 MBD3L2Q8NHZ7 208 aaPredicted RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 DNAJA3Q96EY1 480 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 GMPPAQ96IJ6 420 aaPredicted RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 RBM4BQ9BQ04 359 aaKnown RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 TTYH2Q9BSA4 534 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 RBM4Q9BWF3 364 aaKnown RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 UCK2Q9BZX2 261 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 FANCFQ9NPI8 374 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 TINAGQ9UJW2 476 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 OAZ3Q9UMX2 235 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 HIF3AQ9Y2N7 669 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 FAM215AQ9Y5M1 114 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 NOX1Q9Y5S8 564 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 ESPL1Q14674 2120 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 ZFYVE26Q68DK2 2539 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 IGKV3D-15A0A087WSY6 115 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 HSPB2A8KAH6 182 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 ZNF724A8MTY0 619 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 BLOC1S5-TXNDC5H3BN57 136 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 CDC42EP2O14613 210 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 AKAP8O43823 692 aaKnown RBP10.31□□□□□ -0.76
LSM2-214ENST00000493387 PTP4A3O75365 173 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 AQP8O94778 261 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 NDUFB2O95178 105 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 TGM6O95932 706 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 PLGP00747 810 aaPredicted RBP10.31□□□□□ -0.76
LSM2-214ENST00000493387 TSPAN19P0C672 248 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 ADORA3P0DMS8 318 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 GLI4P10075 376 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 ZNF43P17038 809 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 PRKACGP22612 351 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 UQCRC1P31930 480 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 P2RY4P51582 365 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 PER3P56645 1201 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 RPS4XP62701 263 aaKnown RBP10.31□□□□□ -0.76
LSM2-214ENST00000493387 IL1RL1Q01638 556 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 SLC34A1Q06495 639 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 C1DQ13901 141 aaKnown RBP10.31□□□□□ -0.76
LSM2-214ENST00000493387 SLC17A1Q14916 467 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 HSPB2Q16082 182 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 IGFBP7Q16270 282 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 RIPPLY2Q5TAB7 128 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 ZBTB49Q6ZSB9 765 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 CCDC103Q8IW40 242 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 UEVLDQ8IX04 471 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 OR13C2Q8NGS9 318 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 OR51A7Q8NH64 312 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 GTPBP3Q969Y2 492 aaKnown RBP10.31□□□□□ -0.76
LSM2-214ENST00000493387 EME1Q96AY2 570 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 TNFRSF13CQ96RJ3 184 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 BCO1Q9HAY6 547 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 INIPQ9NRY2 104 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 TAS2R5Q9NYW4 299 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 METRNQ9UJH8 293 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 SIGLEC7Q9Y286 467 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 POFUT2Q9Y2G5 429 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 MEMO1Q9Y316 297 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 ORC6Q9Y5N6 252 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 ITPR1Q14643 2758 aa10.31□□□□□ -0.76
LSM2-214ENST00000493387 TRAV27A0A087WT01 109 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 IGHV3-15A0A0B4J1V0 119 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 A0A1W2PRG6 482 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 NPIPB13A6NJU9 1138 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 NPIPB4C9JG80 1138 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 MS4A18H0YCH9 400 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 CCL21O00585 134 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 CASQ2O14958 399 aaPredicted RBP10.3□□□□□ -0.76
LSM2-214ENST00000493387 RNF13O43567 381 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 YES1P07947 543 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 POU2F1P14859 743 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 CDH2P19022 906 aaPredicted RBP10.3□□□□□ -0.76
LSM2-214ENST00000493387 GNLYP22749 145 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 AHCYP23526 432 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 SLC6A6P31641 620 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 CEACAM8P31997 349 aaPredicted RBP10.3□□□□□ -0.76
LSM2-214ENST00000493387 AQP2P41181 271 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 RPL18Q07020 188 aaKnown RBP10.3□□□□□ -0.76
LSM2-214ENST00000493387 DAG1Q14118 895 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 TRIP10Q15642 601 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 RFX4Q33E94 735 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 MS4A18Q3C1V0 323 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 C4orf17Q53FE4 359 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 ALG10Q5BKT4 473 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 TMEM201Q5SNT2 666 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 SMARCD3Q6STE5 483 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 DPY19L2P2Q6ZN68 376 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 ZNF620Q6ZNG0 422 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 HDDC2Q7Z4H3 204 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 GPAT4Q86UL3 456 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 MEX3DQ86XN8 651 aaKnown RBP10.3□□□□□ -0.76
LSM2-214ENST00000493387 HS3ST5Q8IZT8 346 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 PARP8Q8N3A8 854 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 C9orf106Q8NAJ2 232 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 OR9K2Q8NGE7 335 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 OR52L1Q8NGH7 329 aa10.3□□□□□ -0.76
LSM2-214ENST00000493387 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms