RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CLDN1O95832 211 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 ADORA3P0DMS8 318 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 AHCYP23526 432 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 TRIP10Q15642 601 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 TMEM225Q6GV28 225 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 RTL6Q6ICC9 239 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 C1orf94Q6P1W5 598 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 PAQR6Q6TCH4 344 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 NCCRP1Q6ZVX7 275 aaPredicted RBP15.35■□□□□ 0.05
LIME1-208ENST00000493265 TMPRSS11FQ6ZWK6 438 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 MCEMP1Q8IX19 187 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 SVOPLQ8N434 492 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 ABHD3Q8WU67 409 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 ZNF775Q96BV0 537 aaPredicted RBP15.35■□□□□ 0.05
LIME1-208ENST00000493265 NRBF2Q96F24 287 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 TNFRSF13CQ96RJ3 184 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 NIPSNAP1Q9BPW8 284 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 SMURF2Q9HAU4 748 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 CLCF1Q9UBD9 225 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 ERRFI1Q9UJM3 462 aaPredicted RBP15.35■□□□□ 0.05
LIME1-208ENST00000493265 MGAT4BQ9UQ53 548 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 FAM215AQ9Y5M1 114 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 CORINQ9Y5Q5 1042 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 CRYBG3Q68DQ2 2970 aa15.35■□□□□ 0.05
LIME1-208ENST00000493265 AQP7P3A6NL99 342 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 PLPP3O14495 311 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 ASAH2BP0C7U1 165 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 PTGER4P35408 488 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 AQP2P41181 271 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 AGFG1P52594 562 aaKnown RBP15.34■□□□□ 0.05
LIME1-208ENST00000493265 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 NSUN5P2Q63ZY6 315 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 B3GNT6Q6ZMB0 384 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 EPHX4Q8IUS5 362 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 GCNT2Q8N0V5 402 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 C9orf106Q8NAJ2 232 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 MOSPD2Q8NHP6 518 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 ZNF556Q9HAH1 456 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 MRPL39Q9NYK5 338 aaKnown RBP15.34■□□□□ 0.05
LIME1-208ENST00000493265 STX18Q9P2W9 335 aaKnown RBP15.34■□□□□ 0.05
LIME1-208ENST00000493265 IL20RAQ9UHF4 553 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 ZNF175Q9Y473 711 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 KIAA1549Q9HCM3 1950 aa15.34■□□□□ 0.05
LIME1-208ENST00000493265 CELSR2Q9HCU4 2923 aa15.33■□□□□ 0.05
LIME1-208ENST00000493265 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 KLF4O43474 513 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 RNF13O43567 381 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 DNPH1O43598 174 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 MGRN1O60291 552 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 HPRP00739 348 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 PLGP00747 810 aaPredicted RBP15.33■□□□□ 0.04
LIME1-208ENST00000493265 IGF2P01344 180 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 HOXD4P09016 255 aaPredicted RBP15.33■□□□□ 0.04
LIME1-208ENST00000493265 ANXA8P13928 327 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 FPR3P25089 353 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 CA7P43166 264 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 GSSP48637 474 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 DAPP51397 102 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 PER3P56645 1201 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 H3F3AP84243 136 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 RPL18Q07020 188 aaKnown RBP15.33■□□□□ 0.04
LIME1-208ENST00000493265 RASGEF1BQ0VAM2 473 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 PMPCAQ10713 525 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 GTF3C1Q12789 2109 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 TSPAN31Q12999 210 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 ZBED5Q49AG3 693 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 LPCAT4Q643R3 524 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 GALNT5Q7Z7M9 940 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 ADGRE4PQ86SQ3 457 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 IGFN1Q86VF2 1251 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 CBR4Q8N4T8 237 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 SCAIQ8N9R8 606 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 WNT2BQ93097 391 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 EME1Q96AY2 570 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 UCK2Q9BZX2 261 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 CALHM2Q9HA72 323 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 RNPEPL1Q9HAU8 725 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 B3GALT5Q9Y2C3 310 aa15.33■□□□□ 0.04
LIME1-208ENST00000493265 ARRDC5A6NEK1 342 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 CD8B2A6NJW9 211 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 MS4A18H0YCH9 400 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 CCL21O00585 134 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 CYTIPO60759 359 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 SOX14O95416 240 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 ATP6V1G2O95670 118 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 ADAP00813 363 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 F13BP05160 661 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 IGFBP1P08833 259 aaPredicted RBP15.32■□□□□ 0.04
LIME1-208ENST00000493265 GLI4P10075 376 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 FCGR2AP12318 317 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 SLC9A3P48764 834 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 P2RY4P51582 365 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 SLC34A1Q06495 639 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 PUDPQ08623 228 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 C1DQ13901 141 aaKnown RBP15.32■□□□□ 0.04
LIME1-208ENST00000493265 MS4A18Q3C1V0 323 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 FJX1Q86VR8 437 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 FANK1Q8TC84 345 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 RNF128Q8TEB7 428 aa15.32■□□□□ 0.04
LIME1-208ENST00000493265 LIPHQ8WWY8 451 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms