RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SELENOPP49908 381 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 SNRPD2P62316 118 aaKnown RBP10.88□□□□□ -0.67
COL6A1-205ENST00000492851 CDK6Q00534 326 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 C1DQ13901 141 aaKnown RBP10.88□□□□□ -0.67
COL6A1-205ENST00000492851 TBRG1Q3YBR2 411 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 CHRFAM7AQ494W8 412 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 GTDC1Q4AE62 458 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 HIKESHIQ53FT3 197 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 GCNT6Q5T4J0 391 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 FAM69AQ5T7M9 428 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 B3GLCTQ6Y288 498 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 H1FNTQ75WM6 255 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF540Q8NDQ6 660 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 PIK3C3Q8NEB9 887 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 OR6S1Q8NH40 331 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 BCL2L2Q92843 193 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-205ENST00000492851 SPDL1Q96EA4 605 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 SLC47A1Q96FL8 570 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 EPYCQ99645 322 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 TMEM38AQ9H6F2 299 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 TMEM27Q9HBJ8 222 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 MYOZ1Q9NP98 299 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-205ENST00000492851 CCDC167Q9P0B6 97 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 MOKQ9UQ07 419 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 CHST2Q9Y4C5 530 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 CORINQ9Y5Q5 1042 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 FN1P02751 2386 aaKnown RBP10.87□□□□□ -0.67
COL6A1-205ENST00000492851 TRAV36DV7A0A075B6V5 113 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 ATP6V1G2-DDX39BF2Z307 99 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 FZD7O75084 574 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 LGI1O95970 557 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 ERCC1P07992 297 aaPredicted RBP10.87□□□□□ -0.67
COL6A1-205ENST00000492851 NUDT7P0C024 238 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 IDH3AP50213 366 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 ATP4BP51164 291 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 CLDN17P56750 224 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 NCALDP61601 193 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 VLDLRP98155 873 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 SLC25A3Q00325 362 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 ROR2Q01974 943 aaKnown RBP10.87□□□□□ -0.67
COL6A1-205ENST00000492851 SWI5Q1ZZU3 235 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 TMEM249Q2WGJ8 235 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 ALG10BQ5I7T1 473 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 DHRS4L2Q6PKH6 230 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 SNX32Q86XE0 403 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 ADPRHL1Q8NDY3 354 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 MAL2Q969L2 176 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
COL6A1-205ENST00000492851 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 CRNNQ9UBG3 495 aaPredicted RBP10.87□□□□□ -0.67
COL6A1-205ENST00000492851 TESQ9UGI8 421 aaKnown RBP10.87□□□□□ -0.67
COL6A1-205ENST00000492851 CDC42EP3Q9UKI2 254 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 ADAM21Q9UKJ8 722 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 FREM1Q5H8C1 2179 aa10.87□□□□□ -0.67
COL6A1-205ENST00000492851 USF3Q68DE3 2245 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 IGHV1-18A0A0C4DH31 117 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 UPK3AO75631 287 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF432O94892 652 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 ARAFP10398 606 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 CBR1P16152 277 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 GPX2P18283 190 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 USF1P22415 310 aaPredicted RBP10.86□□□□□ -0.67
COL6A1-205ENST00000492851 ARR3P36575 388 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 PDLIM4P50479 330 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 EGR4Q05215 589 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 SWT1Q5T5J6 900 aaKnown RBP10.86□□□□□ -0.67
COL6A1-205ENST00000492851 CYB5R2Q6BCY4 276 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 CXXC5Q7LFL8 322 aaKnown RBP10.86□□□□□ -0.67
COL6A1-205ENST00000492851 RANBP3LQ86VV4 465 aaPredicted RBP10.86□□□□□ -0.67
COL6A1-205ENST00000492851 FUNDC1Q8IVP5 155 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 KDM8Q8N371 416 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF525Q8N782 197 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 SCAIQ8N9R8 606 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 NFKBIDQ8NI38 313 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 C10orf105Q8TEF2 133 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 DYDC1Q8WWB3 177 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 FBXO17Q96EF6 278 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 ALKBH3Q96Q83 286 aaPredicted RBP10.86□□□□□ -0.67
COL6A1-205ENST00000492851 MDFIQ99750 246 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 PTDSS2Q9BVG9 487 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 CA10Q9NS85 328 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 LPAR3Q9UBY5 353 aa10.86□□□□□ -0.67
COL6A1-205ENST00000492851 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 A0A087WUJ7 227 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 A0A1B0GWA3 101 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 LOC390937A0A1W2PQ73 354 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 IGKV3-15P01624 115 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 IGLV1-44P01699 117 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 NQO1P15559 274 aaKnown RBP10.85□□□□□ -0.67
COL6A1-205ENST00000492851 HOXB9P17482 250 aaPredicted RBP10.85□□□□□ -0.67
COL6A1-205ENST00000492851 GZMKP49863 264 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 AQP5P55064 265 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 LSM11P83369 360 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL6A1-205ENST00000492851 HOXC5Q00444 222 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 IL1RL1Q01638 556 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 NAAAQ02083 359 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 SCARB2Q14108 478 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 SQLEQ14534 574 aa10.85□□□□□ -0.67
COL6A1-205ENST00000492851 EFNB3Q15768 340 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms