RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SLC13A4Q9UKG4 626 aa7.66□□□□□ -1.18
NUP50-217ENST00000491860 CDC42EP3Q9UKI2 254 aa7.66□□□□□ -1.18
NUP50-217ENST00000491860 PCDHB14Q9Y5E9 798 aa7.66□□□□□ -1.18
NUP50-217ENST00000491860 CORINQ9Y5Q5 1042 aa7.66□□□□□ -1.18
NUP50-217ENST00000491860 USH1CQ9Y6N9 552 aa7.66□□□□□ -1.18
NUP50-217ENST00000491860 ANK2Q01484 3957 aa7.66□□□□□ -1.18
NUP50-217ENST00000491860 B9A039 149 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 FTCDNL1E5RQL4 147 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 RPL36A-HNRNPH2H7BZ11 118 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 ENTPD5O75356 428 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 F12P00748 615 aaPredicted RBP7.65□□□□□ -1.18
NUP50-217ENST00000491860 SLC6A2P23975 617 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 PDLIM4P50479 330 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 ATP4BP51164 291 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 VLDLRP98155 873 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 KRTAP1-1Q07627 177 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 C1DQ13901 141 aaKnown RBP7.65□□□□□ -1.18
NUP50-217ENST00000491860 TBRG1Q3YBR2 411 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 LRIF1Q5T3J3 769 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 GCNT6Q5T4J0 391 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 SWT1Q5T5J6 900 aaKnown RBP7.65□□□□□ -1.18
NUP50-217ENST00000491860 REEP3Q6NUK4 255 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 NIPAL3Q6P499 406 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 ULK3Q6PHR2 472 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 DHRS4L2Q6PKH6 230 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 NBEAL1Q6ZS30 2694 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 SERPINA11Q86U17 422 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 PHC2Q8IXK0 858 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 CLIP4Q8N3C7 705 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 GPR137CQ8N3F9 429 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 ZIC4Q8N9L1 334 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 OR1K1Q8NGR3 316 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 STON2Q8WXE9 905 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 VPS33AQ96AX1 596 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 SPDL1Q96EA4 605 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 DNAJA3Q96EY1 480 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 SLC47A1Q96FL8 570 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 OR52B2Q96RD2 323 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 PAIP1Q9H074 479 aaKnown RBP7.65□□□□□ -1.18
NUP50-217ENST00000491860 TMEM38AQ9H6F2 299 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 B3GAT2Q9NPZ5 323 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 SLC6A13Q9NSD5 602 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 MRGBPQ9NV56 204 aa7.65□□□□□ -1.18
NUP50-217ENST00000491860 CRNNQ9UBG3 495 aaPredicted RBP7.65□□□□□ -1.18
NUP50-217ENST00000491860 ARFGEF3Q5TH69 2177 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 CUBNO60494 3623 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 TRAV36DV7A0A075B6V5 113 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 A0A1W2PR80 420 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 RNF212BA8MTL3 300 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 NDUFS7O75251 213 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 C1QCP02747 245 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 ARAFP10398 606 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 CDH2P19022 906 aaPredicted RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 ARR3P36575 388 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SERPINF1P36955 418 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 RPS5P46782 204 aaKnown RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 GZMKP49863 264 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SELENOPP49908 381 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 P2RY4P51582 365 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 FOXG1P55316 489 aaPredicted RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 CDK6Q00534 326 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SPOCK1Q08629 439 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 BNIP2Q12982 314 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 EFNB3Q15768 340 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SWI5Q1ZZU3 235 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 TMEM249Q2WGJ8 235 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 ALG10BQ5I7T1 473 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 RPS26P11Q5JNZ5 115 aaPredicted RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 BEND6Q5SZJ8 279 aaPredicted RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 C6orf52Q5T4I8 152 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 C9orf135Q5VTT2 229 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 CYB5R2Q6BCY4 276 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 BLOC1S3Q6QNY0 202 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 UGT2A3Q6UWM9 527 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 B3GLCTQ6Y288 498 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 H1FNTQ75WM6 255 aaPredicted RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 RANBP3LQ86VV4 465 aaPredicted RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 EPHX4Q8IUS5 362 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SLC30A8Q8IWU4 369 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SCAIQ8N9R8 606 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 NUP37Q8NFH4 326 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 OR9I1Q8NGQ6 314 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SLC25A36Q96CQ1 311 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 LRR1Q96L50 414 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 ANKRD27Q96NW4 1050 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 PIMREGQ9BSJ6 248 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 C1QTNF6Q9BXI9 259 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 ASPNQ9BXN1 380 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 RAB1BQ9H0U4 201 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 DENND2DQ9H6A0 471 aaPredicted RBP7.64□□□□□ -1.19
NUP50-217ENST00000491860 ZNF442Q9H7R0 627 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 TMEM27Q9HBJ8 222 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 FBXL3Q9UKT7 428 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 MOKQ9UQ07 419 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 SPEF1Q9Y4P9 236 aa7.64□□□□□ -1.19
NUP50-217ENST00000491860 IGHV4-30-2A0A087WSY4 118 aa7.63□□□□□ -1.19
NUP50-217ENST00000491860 A0A087WUJ7 227 aa7.63□□□□□ -1.19
NUP50-217ENST00000491860 IGHV1-18A0A0C4DH31 117 aa7.63□□□□□ -1.19
NUP50-217ENST00000491860 LOC390937A0A1W2PQ73 354 aa7.63□□□□□ -1.19
NUP50-217ENST00000491860 ATP6V1G2-DDX39BF2Z307 99 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms