RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SIRT3Q9NTG7 399 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 SEC14L3Q9UDX4 400 aa8.54□□□□□ -1.04
BRCA1-219ENST00000491747 DIMT1Q9UNQ2 313 aaKnown RBP8.54□□□□□ -1.04
BRCA1-219ENST00000491747 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 TO15178 435 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 PPM1BO75688 479 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 GLSO94925 669 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 RAB36O95755 333 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 P04436 131 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 H1F0P07305 194 aaKnown RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 RNF224P0DH78 156 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 ELAVL4P26378 380 aaKnown RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 HLA-DMAP28067 261 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 CD83Q01151 205 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 PYDC2Q56P42 97 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 LCN1P1Q5VSP4 162 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 GFRALQ6UXV0 394 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 FGD2Q7Z6J4 655 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 TCTE3Q8IZS6 198 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 GIMAP5Q96F15 307 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 FAM173AQ9BQD7 235 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 MED18Q9BUE0 208 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 TTTY12Q9BZ98 90 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 ACSS1Q9NUB1 689 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 KLHL21Q9UJP4 597 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 OSGIN2Q9Y236 505 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 GTF3C1Q12789 2109 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 OR6C70A6NIJ9 312 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 FAM166BA8MTA8 275 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 ARHGEF9O43307 516 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 TSPAN2O60636 221 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 HCN1O60741 890 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 BCHEP06276 602 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 RFPL3SP0C7P2 107 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 DDX5P17844 614 aaKnown RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 GPC1P35052 558 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 PTGDSP41222 190 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 TGM4P49221 684 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 NRG3P56975 720 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 DCAF7P61962 342 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 GALK2Q01415 458 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 MLC1Q15049 377 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 SAXO2Q658L1 398 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 C22orf42Q6IC83 251 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 DND1Q8IYX4 353 aaKnown RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 FAM26EQ8N5C1 309 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 POGLUT1Q8NBL1 392 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 C19orf18Q8NEA5 215 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 DIO2Q92813 273 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 ZBED6CLQ96FA7 236 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 DEFB127Q9H1M4 99 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 MIXL1Q9H2W2 232 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 ACOXLQ9NUZ1 547 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 NTMQ9P121 344 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 PLEKHB1Q9UF11 243 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-219ENST00000491747 GSTK1Q9Y2Q3 226 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 HRH3Q9Y5N1 445 aa8.53□□□□□ -1.04
BRCA1-219ENST00000491747 IRGMA1A4Y4 181 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 C2orf72A6NCS6 295 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 LRRC3CA6NJW4 275 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 SNTNA6NMZ2 147 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 TLX2O43763 284 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-219ENST00000491747 CELA3AP09093 270 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 IFI6P09912 130 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 SDC2P34741 201 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 MAP3K8P41279 467 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 PRKAG1P54619 331 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 WNT4P56705 351 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 PPIAP62937 165 aaKnown RBP8.52□□□□□ -1.05
BRCA1-219ENST00000491747 PPP3R1P63098 170 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 PLCXD2Q0VAA5 305 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 FAPQ12884 760 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 COX10Q12887 443 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF155Q12901 538 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-219ENST00000491747 SEC23BQ15437 767 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 CCDC58Q4VC31 144 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 SLC25A30Q5SVS4 291 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 FNDC7Q5VTL7 733 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 TRIQKQ629K1 86 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 MZT2BQ6NZ67 158 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 PGBD2Q6P3X8 592 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 PLCZ1Q86YW0 608 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 LIX1LQ8IVB5 337 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 TMEM251Q8N6I4 163 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 NUP43Q8NFH3 380 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 OR52I1Q8NGK6 324 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 ZFAND1Q8TCF1 268 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 SLC38A5Q8WUX1 472 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 C16orf58Q96GQ5 468 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 DHRS1Q96LJ7 313 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 LMF2Q9BU23 707 aaKnown RBP8.52□□□□□ -1.05
BRCA1-219ENST00000491747 POLDIP3Q9BY77 421 aaKnown RBP8.52□□□□□ -1.05
BRCA1-219ENST00000491747 CXorf36Q9H7Y0 433 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 A4GALTQ9NPC4 353 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 EQTNQ9NQ60 294 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 TVP23BQ9NYZ1 205 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 CNIH4Q9P003 139 aa8.52□□□□□ -1.05
BRCA1-219ENST00000491747 ERRFI1Q9UJM3 462 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-219ENST00000491747 SPIN1Q9Y657 262 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-219ENST00000491747 PCNX3Q9H6A9 2034 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms