RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PHEXP78562 749 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 STX3Q13277 289 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 PMS2P3Q13401 168 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 MADCAM1Q13477 382 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 GNA13Q14344 377 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF77Q15935 545 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 GABRA6Q16445 453 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 KYAT1Q16773 422 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 C18orf21Q32NC0 220 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ADNP2Q6IQ32 1131 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 FAM173BQ6P4H8 233 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF836Q6ZNA1 936 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CYP4Z1Q86W10 505 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 OR4N5Q8IXE1 308 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 KLHDC8BQ8IXV7 354 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 RNF10Q8N5U6 811 aaKnown RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 Q8N9G6 341 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 SUMF1Q8NBK3 374 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM104Q8NE00 496 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 OR13C9Q8NGT0 318 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 OR1L3Q8NH93 324 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 LNX1Q8TBB1 728 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 PLPPR1Q8TBJ4 325 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 TCP10LQ8TDR4 215 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 MYDGFQ969H8 173 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 PLEKHA8Q96JA3 519 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ART5Q96L15 291 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CPXM1Q96SM3 734 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC29A1Q99808 456 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 NEURL2Q9BR09 285 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM175Q9BSA9 504 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 NAA50Q9GZZ1 169 aaKnown RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 RACGAP1Q9H0H5 632 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 FAM49AQ9H0Q0 323 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 PPA2Q9H2U2 334 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 MEPEQ9NQ76 525 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 DUOX1Q9NRD9 1551 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 MRPL39Q9NYK5 338 aaKnown RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 KLRF1Q9NZS2 232 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CHMP5Q9NZZ3 219 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 STOX2Q9P2F5 926 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 MRM2Q9UI43 246 aaKnown RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 NPIPA1Q9UND3 350 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ALG6Q9Y672 507 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ANKRD36CQ5JPF3 1778 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 DLEC1Q9Y238 1755 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 GRIN2DO15399 1336 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CDHR2Q9BYE9 1310 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 IBTKQ9P2D0 1353 aaPredicted RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 RIC1Q4ADV7 1423 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 PDZK1P1A8MUH7 402 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 H3BMQ9 156 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 GFYI3L273 518 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 GOLGA8RI6L899 631 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 CCSO14618 274 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 RAB29O14966 203 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 TM9SF1O15321 606 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 PPIHO43447 177 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 CALUO43852 315 aaPredicted RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 MMP1P03956 469 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 ATP1A1P05023 1023 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 RD3LP0DJH9 198 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 NR2C1P13056 603 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 POLR2EP19388 210 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 YWHABP31946 246 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 RPL13AP40429 203 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 NAA10P41227 235 aaPredicted RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF85Q03923 595 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 KLRC3Q07444 240 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 ST3GAL3Q11203 375 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 SRSF9Q13242 221 aaKnown RBP eCLIP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 SLAMF1Q13291 335 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 SERTAD2Q14140 314 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 TSC22D1Q15714 1073 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 LGSNQ5TDP6 509 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 SEL1L2Q5TEA6 688 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 WDR25Q64LD2 544 aaPredicted RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 ADAM5Q6NVV9 412 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 SCYL2Q6P3W7 929 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 ATRAIDQ6UW56 229 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 LEKR1Q6ZMV7 388 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 STXBP4Q6ZWJ1 553 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 TRMT10CQ7L0Y3 403 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 PIGZQ86VD9 579 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 VPS36Q86VN1 386 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 RANBP3LQ86VV4 465 aaPredicted RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 MMAAQ8IVH4 418 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 KIRREL3Q8IZU9 778 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 MS4A15Q8N5U1 240 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 KIR3DL3Q8N743 410 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 DMBX1Q8NFW5 382 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 OR7G1Q8NGA0 311 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 CDC26Q8NHZ8 85 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 NUBPLQ8TB37 319 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 PIH1D2Q8WWB5 315 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 TNFRSF14Q92956 283 aa2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF514Q96K75 400 aaPredicted RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 CNN2Q99439 309 aaKnown RBP2.66□□□□□ -1.98
DEPDC1-204ENST00000489862 LPAR4Q99677 370 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms