RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 GCNT4Q9P109 453 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 PITPNC1Q9UKF7 332 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 VANGL2Q9ULK5 521 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 FRMPD3Q5JV73 1810 aa3.18□□□□□ -1.9
XRN1-213ENST00000489241 IGLV3-22A0A075B6J6 115 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 SMCO3A2RU48 225 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 LSM1O15116 133 aaKnown RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 CASC3O15234 703 aaKnown RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 IGHV3-48P01763 117 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 KLK3P07288 261 aaPredicted RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 OR8G3PP0DMU2 310 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 ATP6V1B2P21281 511 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 OTX1P32242 354 aaPredicted RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 YAP1P46937 504 aaKnown RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 OR3A4PP47883 348 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 KLK7P49862 253 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 RGS8P57771 180 aaPredicted RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 IL18Q14116 193 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 MRPL23Q16540 153 aaKnown RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 VPS26BQ4G0F5 336 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 UTF1Q5T230 341 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 ZNF658Q5TYW1 1059 aaPredicted RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 C11orf71Q6IPW1 123 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 TMEM220Q6QAJ8 160 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 Q6ZR54 194 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 Q6ZSR3 168 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 CENPQQ7L2Z9 268 aaPredicted RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 PRSS41Q7RTY9 318 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 FAM220AQ7Z4H9 259 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 LUZP2Q86TE4 346 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 ZNF589Q86UQ0 364 aaPredicted RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 SPAG16Q8N0X2 631 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 OR10H4Q8NGA5 316 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 SLC22A8Q8TCC7 542 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 TSEN15Q8WW01 171 aaKnown RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 PEX13Q92968 403 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 RIOK1Q9BRS2 568 aaKnown RBP3.17□□□□□ -1.9
XRN1-213ENST00000489241 C20orf24Q9BUV8 137 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 SELENOIQ9C0D9 397 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 MFFQ9GZY8 342 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 RNF167Q9H6Y7 350 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 LY9Q9HBG7 655 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 GIN1Q9NXP7 522 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 DCDC2Q9UHG0 476 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 KIF25Q9UIL4 384 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 NUP50Q9UKX7 468 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 MOKQ9UQ07 419 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 UGT2A1Q9Y4X1 527 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 V9GY05 133 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 SYNRGQ9UMZ2 1314 aa3.17□□□□□ -1.9
XRN1-213ENST00000489241 TRBV11-1A0A0K0K1C0 115 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 A6NIZ1 184 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 CLOCKO15516 846 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 SRSF10O75494 262 aaKnown RBP3.16□□□□□ -1.9
XRN1-213ENST00000489241 SERF1AO75920 110 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 OR2F2O95006 317 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 H6PDO95479 791 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 FGF1P05230 155 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 CXCR2P25025 360 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 PRDX3P30048 256 aaKnown RBP3.16□□□□□ -1.9
XRN1-213ENST00000489241 PRKAR2BP31323 418 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 IFNA8P32881 189 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 BTDP43251 543 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 RAP1BP61224 184 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 TLE4Q04727 773 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 ZNF763Q0D2J5 394 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 MERTKQ12866 999 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 CHRNA6Q15825 494 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 PRR30Q53SZ7 412 aaPredicted RBP3.16□□□□□ -1.9
XRN1-213ENST00000489241 MARCH8Q5T0T0 291 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 C1orf94Q6P1W5 598 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 BAIAP2L2Q6UXY1 529 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 EIF3MQ7L2H7 374 aaKnown RBP3.16□□□□□ -1.9
XRN1-213ENST00000489241 ZNF525Q8N782 197 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 BPIFCQ8NFQ6 507 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 OR52I1Q8NGK6 324 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 ZNF564Q8TBZ8 553 aaPredicted RBP3.16□□□□□ -1.9
XRN1-213ENST00000489241 GPR151Q8TDV0 419 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 KIFAP3Q92845 792 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 NEIL2Q969S2 332 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 ITCHQ96J02 903 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 ZNF578Q96N58 590 aaPredicted RBP3.16□□□□□ -1.9
XRN1-213ENST00000489241 OR8B4Q96RC9 309 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 RACGAP1Q9H0H5 632 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 C20orf85Q9H1P6 137 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 AUNIPQ9H7T9 357 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 ISG20L2Q9H9L3 353 aaKnown RBP3.16□□□□□ -1.9
XRN1-213ENST00000489241 TREM2Q9NZC2 230 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 B4GALT7Q9UBV7 327 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 N6AMT1Q9Y5N5 214 aa3.16□□□□□ -1.9
XRN1-213ENST00000489241 HCFC1P51610 2035 aa3.15□□□□□ -1.9
XRN1-213ENST00000489241 INSRP06213 1382 aa3.15□□□□□ -1.9
XRN1-213ENST00000489241 IGHV3OR16-13A0A075B7E8 117 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 H0YC42 278 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 GOSR2O14653 212 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 EIF3HO15372 352 aaKnown RBP eCLIP3.15□□□□□ -1.91
XRN1-213ENST00000489241 OR2J3O76001 311 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 TSPAN13O95857 204 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 IGHV2-5P01817 119 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms