RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 SLC10A7Q0GE19 358 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 ST3GAL3Q11203 375 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 CUL1Q13616 776 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 IL18Q14116 193 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 SELPLGQ14242 412 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 NDUFA5Q16718 116 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 NDUFA9Q16795 377 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 EXOC3L2Q2M3D2 409 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 LINC01620Q4KN68 170 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 SPANXN2Q5MJ10 180 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 C10orf120Q5SQS8 335 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 PIP5KL1Q5T9C9 394 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 PRAMEF5Q5TYX0 476 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 PRAMEF6Q5VXH4 476 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 LRRC66Q68CR7 880 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 PVRIGQ6DKI7 326 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 ACSM5Q6NUN0 579 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 CCDC121Q6ZUS5 278 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 NLRP9Q7RTR0 991 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 SPATA24Q86W54 205 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 CDR2LQ86X02 465 aaPredicted RBP2.65□□□□□ -1.99
SSR1-209ENST00000488834 ECHDC2Q86YB7 292 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 RNF10Q8N5U6 811 aaKnown RBP2.65□□□□□ -1.99
SSR1-209ENST00000488834 LINC01555Q8NAE3 123 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 OR9K2Q8NGE7 335 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 M1APQ8TC57 530 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 AENQ8WTP8 325 aaKnown RBP2.65□□□□□ -1.99
SSR1-209ENST00000488834 MAIP1Q8WWC4 291 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 SNF8Q96H20 258 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 C12orf66Q96MD2 445 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 TESK2Q96S53 571 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 PLEKHF1Q96S99 279 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 NPY6RQ99463 290 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 EBF4Q9BQW3 602 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 RIOK1Q9BRS2 568 aaKnown RBP2.65□□□□□ -1.99
SSR1-209ENST00000488834 TMEM43Q9BTV4 400 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 DUSP16Q9BY84 665 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 PPDPFQ9H3Y8 114 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 MEAF6Q9HAF1 191 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 CYP3A43Q9HB55 503 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 DMAP1Q9NPF5 467 aaPredicted RBP2.65□□□□□ -1.99
SSR1-209ENST00000488834 LZTFL1Q9NQ48 299 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 UBQLN1Q9UMX0 589 aaKnown RBP2.65□□□□□ -1.99
SSR1-209ENST00000488834 NEU3Q9UQ49 428 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 PLLPQ9Y342 182 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 OR10H1Q9Y4A9 318 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 MYH7P12883 1935 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 NPATQ14207 1427 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 NCOA1Q15788 1441 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 THOC2Q8NI27 1593 aaKnown RBP2.65□□□□□ -1.99
SSR1-209ENST00000488834 PLEKHH2Q8IVE3 1493 aa2.65□□□□□ -1.99
SSR1-209ENST00000488834 AKAP12Q02952 1782 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 NOTCH2Q04721 2471 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 MYH11P35749 1972 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 LOC105371267A0A1B0GV96 52 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 A0A1B0GVG6 124 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 FAM240BA0A1B0GVZ2 78 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 HEATR9A2RTY3 570 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 ZNF879B4DU55 563 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 TCP11X1B4DZS4 312 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 ANKRD65E5RJM6 399 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 PPIAL4DF5H284 164 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 H3BQF6 201 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 RNF13O43567 381 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 FCMRO60667 390 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 SMIM24O75264 130 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 BCAS1O75363 584 aaPredicted RBP2.64□□□□□ -1.99
SSR1-209ENST00000488834 YEATS4O95619 227 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 LGI1O95970 557 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 S100A6P06703 90 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 CAPN1P07384 714 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 ZNF44P15621 663 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 IGLL1P15814 213 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 ZNF17P17021 662 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 POLR2EP19388 210 aaKnown RBP2.64□□□□□ -1.99
SSR1-209ENST00000488834 UQCRC2P22695 453 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 NMT1P30419 496 aaKnown RBP2.64□□□□□ -1.99
SSR1-209ENST00000488834 STARP49675 285 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 PPT1P50897 306 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 CCNG1P51959 295 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 FGL1Q08830 312 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 TATDN3Q17R31 274 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 LIN9Q5TKA1 542 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 AGBL2Q5U5Z8 902 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 TWF2Q6IBS0 349 aaKnown RBP2.64□□□□□ -1.99
SSR1-209ENST00000488834 ZSCAN25Q6NSZ9 544 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 TMEM53Q6P2H8 277 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 FAHD2BQ6P2I3 314 aaPredicted RBP2.64□□□□□ -1.99
SSR1-209ENST00000488834 ARCQ7LC44 396 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 C16orf62Q7Z3J2 963 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 ACOT1Q86TX2 421 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 SKA3Q8IX90 412 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 KATNAL2Q8IYT4 538 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 FAM9CQ8IZT9 166 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 LRRC75A-AS1Q8N1F1 130 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 TCAIMQ8N3R3 496 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 COMMD1Q8N668 190 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 TMEM252Q8N6L7 170 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 ANKFN1Q8N957 763 aa2.64□□□□□ -1.99
SSR1-209ENST00000488834 DCAF4L2Q8NA75 395 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms