RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 COQ5Q5HYK3 327 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 SWT1Q5T5J6 900 aaKnown RBP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 NANOGP8Q6NSW7 305 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 KLHL17Q6TDP4 642 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 KLHL24Q6TFL4 600 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 ABHD12BQ7Z5M8 362 aaPredicted RBP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 WDR31Q8NA23 367 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 VANGL1Q8TAA9 524 aaPredicted RBP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 SMAP2Q8WU79 429 aaPredicted RBP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 LRRC58Q96CX6 371 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 C18orf12Q96KH6 178 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 MCHR1Q99705 422 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 C1QTNF6Q9BXI9 259 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 GSX1Q9H4S2 264 aaPredicted RBP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 NANOGQ9H9S0 305 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 ZNF701Q9NV72 531 aaPredicted RBP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 AMDHD2Q9Y303 409 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 MAGED1Q9Y5V3 778 aaPredicted RBP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 CAPN7Q9Y6W3 813 aa15.57■□□□□ 0.08
ITGB1-215ENST00000488494 NIPBLQ6KC79 2804 aaeCLIP15.57■□□□□ 0.08
ITGB1-215ENST00000488494 CPSF4LA6NMK7 179 aaKnown RBP15.56■□□□□ 0.08
ITGB1-215ENST00000488494 FMO6PO60774 539 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 TMCC2O75069 709 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 LGI1O95970 557 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 DANCRP0C864 163 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 PAX1P15863 534 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 ZNF43P17038 809 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 CD40P25942 277 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 CRYBA2P53672 197 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 ATP5J2P56134 94 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 CLDN17P56750 224 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 C1DQ13901 141 aaKnown RBP15.56■□□□□ 0.08
ITGB1-215ENST00000488494 VMACQ2NL98 169 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 HIKESHIQ53FT3 197 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 INTS11Q5TA45 600 aaKnown RBP15.56■□□□□ 0.08
ITGB1-215ENST00000488494 PRSS57Q6UWY2 283 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 OR8J3Q8NGG0 315 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 OR6T1Q8NGN1 323 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 SLC26A7Q8TE54 656 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 EPYCQ99645 322 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 ARMCX1Q9P291 453 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 RCE1Q9Y256 329 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 B3GALT5Q9Y2C3 310 aa15.56■□□□□ 0.08
ITGB1-215ENST00000488494 TRIM64A6NGJ6 449 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 TRIM64BA6NI03 449 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 UPK3AO75631 287 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 C8BP07358 591 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 NQO1P15559 274 aaKnown RBP15.55■□□□□ 0.08
ITGB1-215ENST00000488494 PTAFRP25105 342 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 PGGHGQ32M88 737 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 ENTPD8Q5MY95 495 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 ZNF613Q6PF04 617 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 SLC22A25Q6T423 547 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 H1FNTQ75WM6 255 aaPredicted RBP15.55■□□□□ 0.08
ITGB1-215ENST00000488494 LINGO2Q7L985 606 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 CALHM3Q86XJ0 350 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 RBM45Q8IUH3 476 aaKnown RBP15.55■□□□□ 0.08
ITGB1-215ENST00000488494 C10orf53Q8N6V4 93 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 ADPRHL1Q8NDY3 354 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 OR4D11Q8NGI4 311 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 C10orf82Q8WW14 230 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 GTPBP3Q969Y2 492 aaKnown RBP15.55■□□□□ 0.08
ITGB1-215ENST00000488494 OXGR1Q96P68 337 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 SMR3AQ99954 134 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 SH3GL1Q99961 368 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 TMEM43Q9BTV4 400 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 ASPNQ9BXN1 380 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 CISD1Q9NZ45 108 aaKnown RBP15.55■□□□□ 0.08
ITGB1-215ENST00000488494 POU2F3Q9UKI9 436 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 USP22Q9UPT9 525 aa15.55■□□□□ 0.08
ITGB1-215ENST00000488494 LOC100653049A0A140TA62 436 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 OR6C65A6NJZ3 312 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 H7C1Q1 480 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 TRAF3IP2O43734 574 aaPredicted RBP15.54■□□□□ 0.08
ITGB1-215ENST00000488494 CHP2O43745 196 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 KRT34O76011 436 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 ZNF432O94892 652 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 BGLAPP02818 100 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 INHBBP09529 407 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 CDKN1AP38936 164 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 MDH1P40925 334 aaKnown RBP15.54■□□□□ 0.08
ITGB1-215ENST00000488494 MFSD13AQ14CX5 517 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 TBRG1Q3YBR2 411 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 B3GLCTQ6Y288 498 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 WDR88Q6ZMY6 472 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 CCDC80Q76M96 950 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 OR1K1Q8NGR3 316 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 OR6S1Q8NH40 331 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 RADILQ96JH8 1075 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 COX4I2Q96KJ9 171 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 MOGAT1Q96PD6 335 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 ECSITQ9BQ95 431 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 LINC00470Q9BZP3 86 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 FAIMQ9NVQ4 179 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 MGAT4BQ9UQ53 548 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 CORINQ9Y5Q5 1042 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 ARID1AO14497 2285 aa15.54■□□□□ 0.08
ITGB1-215ENST00000488494 ZANQ9Y493 2812 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 LRRN3E7EW58 273 aa15.53■□□□□ 0.08
ITGB1-215ENST00000488494 OVOL3O00110 214 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms