RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ETFAP13804 333 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 PTNP21246 168 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 ELK4P28324 431 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SLC7A1P30825 629 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 LCN1P31025 176 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 EIF1P41567 113 aaKnown RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 IDH2P48735 452 aaKnown RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 NR1H2P55055 460 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 FOXG1P55316 489 aaPredicted RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SUMO3P55854 103 aaPredicted RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 EEF1A1P68104 462 aaKnown RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 KCNJ10P78508 379 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 HPCAP84074 193 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SF3A3Q12874 501 aaKnown RBP eCLIP5.22□□□□□ -1.575e-6■■□□□ 14.3
CDHR3-213ENST00000488386 BNIP2Q12982 314 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SELENBP1Q13228 472 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SMU1Q2TAY7 513 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 PDSS1Q5T2R2 415 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 C9orf135Q5VTT2 229 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 BHLHB9Q6PI77 547 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SLC2A7Q6PXP3 512 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 ZNF836Q6ZNA1 936 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 EIF3MQ7L2H7 374 aaKnown RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 C10orf111Q8N326 155 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 CIARTQ8N365 385 aaPredicted RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 NATD1Q8N6N6 113 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 MIPOL1Q8TD10 442 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 ZNF75CPQ92670 426 aaPredicted RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 REXO5Q96IC2 774 aaKnown RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 VRK1Q99986 396 aaPredicted RBP5.22□□□□□ -1.57
CDHR3-213ENST00000488386 PSD2Q9BQI7 771 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SLC39A3Q9BRY0 314 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 NMUR2Q9GZQ4 415 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 SLC38A1Q9H2H9 487 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 PLSCR4Q9NRQ2 329 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 EXD2Q9NVH0 621 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 RLIMQ9NVW2 624 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 ELOVL5Q9NYP7 299 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 NKIRAS1Q9NYS0 192 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 ZNF226Q9NYT6 803 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 BTNL2Q9UIR0 455 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 USH1CQ9Y6N9 552 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 DSCAMO60469 2012 aa5.22□□□□□ -1.57
CDHR3-213ENST00000488386 TMED7-TICAM2A0A0A6YYA0 188 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 CDHR4A6H8M9 788 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 TRIM64A6NGJ6 449 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 TRIM64BA6NI03 449 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 TRPC5OSA6NMA1 111 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 SULT2B1O00204 365 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 RFXANKO14593 260 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 CLOCKO15516 846 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 EIF4E2O60573 245 aaKnown RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ERLIN1O75477 346 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 SLC22A3O75751 556 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 NCR1O76036 304 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ANP32DO95626 131 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 AK1P00568 194 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ELANEP08246 267 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 NR2F1P10589 423 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 PRG2P13727 222 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 PGCP20142 388 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 TACR3P29371 465 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 CRATP43155 626 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 DIO1P49895 249 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 MVDP53602 400 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 OR2B6P58173 313 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 NKX6-1P78426 367 aaPredicted RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 HOXC5Q00444 222 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 RASGEF1BQ0VAM2 473 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 CAPRIN1Q14444 709 aaKnown RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 TAB1Q15750 504 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 STK11Q15831 433 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ACKR1Q16570 336 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 SYT14P1Q58G82 188 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 SLC25A53Q5H9E4 307 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 Q5PR19 223 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 C6orf10Q5SRN2 563 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 MRPL2Q5T653 305 aaKnown RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ATAD3BQ5T9A4 648 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 EEF1A1P5Q5VTE0 462 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ATG16L1Q676U5 607 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 C3orf33Q6P1S2 294 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ZNF704Q6ZNC4 412 aaPredicted RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 SPATA19Q7Z5L4 167 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ADGRG3Q86Y34 549 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 P3H2Q8IVL5 708 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 GABRG1Q8N1C3 465 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 FAM71CQ8NEG0 241 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 VPS37AQ8NEZ2 397 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 KBTBD8Q8NFY9 601 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 WDR60Q8WVS4 1066 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 MAL2Q969L2 176 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 CPNE4Q96A23 557 aaPredicted RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 MAELQ96JY0 434 aaKnown RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ZBTB18Q99592 522 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 CCL19Q99731 98 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 CCDC106Q9BWC9 280 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 RSPO3Q9BXY4 272 aaPredicted RBP5.21□□□□□ -1.58
CDHR3-213ENST00000488386 ACER3Q9NUN7 267 aa5.21□□□□□ -1.58
CDHR3-213ENST00000488386 OSGIN1Q9UJX0 560 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms