RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 LIPT1Q9Y234 373 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 PRELID3BQ9Y3B1 194 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 RIF1Q5UIP0 2472 aaKnown RBP12.55□□□□□ -0.4
COPS7B-221ENST00000488111 PCNX2A6NKB5 2137 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 KDM4EB2RXH2 506 aaPredicted RBP12.55□□□□□ -0.4
COPS7B-221ENST00000488111 CELP19835 753 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 GIFP27352 417 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 THBS2P35442 1172 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 SMSP52788 366 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 KIF26BQ2KJY2 2108 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 NKAIN1Q4KMZ8 207 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 PYHIN1Q6K0P9 492 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 FAM199XQ6PEV8 388 aaPredicted RBP12.55□□□□□ -0.4
COPS7B-221ENST00000488111 C3P1Q6ZMU1 363 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 DEF8Q6ZN54 512 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 BTN2A1Q7KYR7 527 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 SHFQ7M4L6 423 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 RBM45Q8IUH3 476 aaKnown RBP12.55□□□□□ -0.4
COPS7B-221ENST00000488111 HORMAD2Q8N7B1 307 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 OR4D11Q8NGI4 311 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 ADAMTS18Q8TE60 1221 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 RAB8BQ92930 207 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 TSLPQ969D9 159 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 NEURL3Q96EH8 262 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 C16orf58Q96GQ5 468 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 RBM18Q96H35 190 aaKnown RBP12.55□□□□□ -0.4
COPS7B-221ENST00000488111 ABHD1Q96SE0 405 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF416Q9BWM5 594 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 CACNG6Q9BXT2 260 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 SCPEP1Q9HB40 452 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 PISDQ9UG56 409 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 BAIAP2Q9UQB8 552 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 PCDHGA1Q9Y5H4 931 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 B3GALT1Q9Y5Z6 326 aa12.55□□□□□ -0.4
COPS7B-221ENST00000488111 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SLC28A2O43868 658 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 NMBP08949 121 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 MMP11P24347 488 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 DCDP81605 110 aaKnown RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 LASP1Q14847 261 aaKnown RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 RRM2BQ7LG56 351 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ZER1Q7Z7L7 766 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 LHFPL3Q86UP9 236 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 POGLUT1Q8NBL1 392 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 NUP43Q8NFH3 380 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 OR5D16Q8NGK9 328 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SFXN2Q96NB2 322 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF649Q9BS31 505 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SERHL2Q9H4I8 314 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF275Q9NSD4 429 aaPredicted RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 COL27A1Q8IZC6 1860 aaPredicted RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 A0A1W2PNU3 283 aaPredicted RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF593O00488 134 aaPredicted RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 EMC8O43402 210 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SSNA1O43805 119 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ATP1B1P05026 303 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 HMGN2P05204 90 aaKnown RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 FGF2P09038 288 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SLC35E2P0CK97 266 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SELENOPP49908 381 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 HSD17B7P56937 341 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 PRICKLE4Q2TBC4 344 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ENTPD8Q5MY95 495 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 IL20RBQ6UXL0 311 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 STT3BQ8TCJ2 826 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 YIPF5Q969M3 257 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 OR1F2PQ96R84 312 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SECISBP2Q96T21 854 aaKnown RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 C7orf50Q9BRJ6 194 aaKnown RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 UQCC2Q9BRT2 126 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ULBP3Q9BZM4 244 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 SAP130Q9H0E3 1048 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 IFT22Q9H7X7 185 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 A4GALTQ9NPC4 353 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
COPS7B-221ENST00000488111 MKL2Q9ULH7 1088 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 A4GNTQ9UNA3 340 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 TMEM5Q9Y2B1 443 aa12.54□□□□□ -0.4
COPS7B-221ENST00000488111 A0A1W2PRQ8 180 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 OR6C65A6NJZ3 312 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 HRKO00198 91 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 DVL2O14641 736 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 FTH1P19P0C7X4 201 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 RORAP35398 523 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 KCNJ5P48544 419 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 BLVRAP53004 296 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 TSPAN5P62079 268 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 MGAT2Q10469 447 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 EXOSC7Q15024 291 aaKnown RBP12.53□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF385CQ66K41 422 aaPredicted RBP12.53□□□□□ -0.4
COPS7B-221ENST00000488111 SIAH3Q8IW03 269 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 TOMM5Q8N4H5 51 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 KLHL36Q8N4N3 616 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 SAMD12Q8N8I0 201 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 BEST4Q8NFU0 473 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 OR52N1Q8NH53 320 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 SLC35G5Q96KT7 338 aa12.53□□□□□ -0.4
COPS7B-221ENST00000488111 ZNF354BQ96LW1 612 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms