RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 P2RY4P51582 365 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 TGFBR3Q03167 851 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 TRAP1Q12931 704 aaKnown RBP12.98□□□□□ -0.33
LIMS3-205ENST00000487150 BNIP1Q12981 228 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ITGADQ13349 1161 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 DGCR6Q14129 220 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 TAF11Q15544 211 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ANKDD1AQ495B1 522 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 FBXW9Q5XUX1 488 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF730Q6ZMV8 503 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 WDR88Q6ZMY6 472 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 AAED1Q7RTV5 226 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 UEVLDQ8IX04 471 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 GABRG1Q8N1C3 465 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 UBE2J2Q8N2K1 259 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 PIK3C3Q8NEB9 887 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ANKK1Q8NFD2 765 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ACOT11Q8WXI4 607 aaPredicted RBP12.98□□□□□ -0.33
LIMS3-205ENST00000487150 CCDC124Q96CT7 223 aaKnown RBP12.98□□□□□ -0.33
LIMS3-205ENST00000487150 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 PIP5K1AQ99755 562 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 PRSS27Q9BQR3 290 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 THTPAQ9BU02 230 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 MED18Q9BUE0 208 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 MMADHCQ9H3L0 296 aaPredicted RBP12.98□□□□□ -0.33
LIMS3-205ENST00000487150 MAGIXQ9H6Y5 334 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ASB6Q9NWX5 421 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 NDUFAF4Q9P032 175 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 TMEM5Q9Y2B1 443 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ADGRG4Q8IZF6 3080 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 PCNX3Q9H6A9 2034 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 RAMP1O60894 148 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 DNAJC8O75937 253 aaPredicted RBP12.97□□□□□ -0.33
LIMS3-205ENST00000487150 KRT33AO76009 404 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 PDE5AO76074 875 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 OR7A10O76100 309 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 CH25HO95992 272 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 THY1P04216 161 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 EPXP11678 715 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 COX5AP20674 150 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 FAM27E3Q08E93 113 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 FAM98BQ52LJ0 330 aaKnown RBP12.97□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF787Q6DD87 383 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 STAC2Q6ZMT1 411 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 CREB3L2Q70SY1 520 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 PXKQ7Z7A4 578 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 TSPYL5Q86VY4 417 aaPredicted RBP12.97□□□□□ -0.33
LIMS3-205ENST00000487150 P2RY8Q86VZ1 359 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 P3H2Q8IVL5 708 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 TMEM255BQ8WV15 326 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 LIPHQ8WWY8 451 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 SLCO5A1Q9H2Y9 848 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 NMNAT1Q9HAN9 279 aaPredicted RBP12.97□□□□□ -0.33
LIMS3-205ENST00000487150 NGBQ9NPG2 151 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 IL1RAPQ9NPH3 570 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 TAS2R16Q9NYV7 291 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 CRIM1Q9NZV1 1036 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
LIMS3-205ENST00000487150 UPB1Q9UBR1 384 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 TESMINQ9Y4I5 508 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 CACNA1CQ13936 2221 aa12.97□□□□□ -0.33
LIMS3-205ENST00000487150 PLPP3O14495 311 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 SLC43A1O75387 559 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 HOXC12P31275 282 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 IFNGR2P38484 337 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 ZP4Q12836 540 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 FGD3Q5JSP0 725 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 SFRP5Q5T4F7 317 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 OR7E24Q6IFN5 339 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 NKAIN4Q8IVV8 208 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 C17orf78Q8N4C9 275 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 C1orf162Q8NEQ5 155 aaPredicted RBP12.96□□□□□ -0.33
LIMS3-205ENST00000487150 BPIFA2Q96DR5 249 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 C7orf34Q96L11 122 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 ADAD1Q96M93 576 aaKnown RBP12.96□□□□□ -0.33
LIMS3-205ENST00000487150 MOGAT1Q96PD6 335 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 ACTR6Q9GZN1 396 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 MCCC2Q9HCC0 563 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 B3GAT2Q9NPZ5 323 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 B3GAT1Q9P2W7 334 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 V9GYQ6 96 aa12.96□□□□□ -0.33
LIMS3-205ENST00000487150 ANKHD1Q8IWZ3 2542 aaKnown RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 KIAA1549Q9HCM3 1950 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ZNF587BE7ETH6 402 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ENTPD5O75356 428 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 PRSS23O95084 383 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ADAP00813 363 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 SEMG1P04279 462 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ASAH2BP0C7U1 165 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 ADORA3P0DMS8 318 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 NR2C1P13056 603 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 AHCYP23526 432 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 PAX7P23759 505 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 CCKARP32238 428 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 MSX2P35548 267 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 YAP1P46937 504 aaKnown RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 SLC9A3P48764 834 aa12.95□□□□□ -0.34
LIMS3-205ENST00000487150 DAP3P51398 398 aaKnown RBP12.95□□□□□ -0.34
LIMS3-205ENST00000487150 UGT2B15P54855 530 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms