RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 CCDC80Q76M96 950 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 CALHM3Q86XJ0 350 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 KDM8Q8N371 416 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 ADPRHL1Q8NDY3 354 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 OR6T1Q8NGN1 323 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 OR6S1Q8NH40 331 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 LILRB1Q8NHL6 650 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-206ENST00000486429 VANGL1Q8TAA9 524 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-206ENST00000486429 IGFBPL1Q8WX77 278 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 ZNF317Q96PQ6 595 aaPredicted RBP16.09■□□□□ 0.17
CLDN11-206ENST00000486429 GID8Q9NWU2 228 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 ARMCX1Q9P291 453 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 RCE1Q9Y256 329 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 B3GALT5Q9Y2C3 310 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 AMDHD2Q9Y303 409 aa16.09■□□□□ 0.17
CLDN11-206ENST00000486429 CPSF4LA6NMK7 179 aaKnown RBP16.08■□□□□ 0.16
CLDN11-206ENST00000486429 ZNF587BE7ETH6 402 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 ABCD4O14678 606 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 CHP2O43745 196 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 AKAP8O43823 692 aaKnown RBP16.08■□□□□ 0.16
CLDN11-206ENST00000486429 CBLP22681 906 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 PTH2RP49190 550 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 CDH11P55287 796 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 CLDN17P56750 224 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 RPS4XP62701 263 aaKnown RBP16.08■□□□□ 0.16
CLDN11-206ENST00000486429 IL1RL1Q01638 556 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 C1DQ13901 141 aaKnown RBP16.08■□□□□ 0.16
CLDN11-206ENST00000486429 ZNF672Q499Z4 452 aaPredicted RBP16.08■□□□□ 0.16
CLDN11-206ENST00000486429 NEUROG1Q92886 237 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 OXGR1Q96P68 337 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 TMEM43Q9BTV4 400 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 ASPNQ9BXN1 380 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 GSX2Q9BZM3 304 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 SLC17A5Q9NRA2 495 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 B3GAT1Q9P2W7 334 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 LAMP3Q9UQV4 416 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 CORINQ9Y5Q5 1042 aa16.08■□□□□ 0.16
CLDN11-206ENST00000486429 MAGED1Q9Y5V3 778 aaPredicted RBP16.08■□□□□ 0.16
CLDN11-206ENST00000486429 ACANP16112 2415 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 NQO1P15559 274 aaKnown RBP16.07■□□□□ 0.16
CLDN11-206ENST00000486429 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
CLDN11-206ENST00000486429 PTAFRP25105 342 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 CRYBA2P53672 197 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 LGALS3BPQ08380 585 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 VEZF1Q14119 521 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 ENTPD8Q5MY95 495 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 C1QTNF12Q5T7M4 302 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 H1FNTQ75WM6 255 aaPredicted RBP16.07■□□□□ 0.16
CLDN11-206ENST00000486429 C10orf53Q8N6V4 93 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 SCAIQ8N9R8 606 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 OR4D11Q8NGI4 311 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 PROX1Q92786 737 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 RCN3Q96D15 328 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 RADILQ96JH8 1075 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 DLL4Q9NR61 685 aa16.07■□□□□ 0.16
CLDN11-206ENST00000486429 FAM220BPB1ANY3 271 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 SHISA9B4DS77 424 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 M0R1B8 84 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 TRAF3IP2O43734 574 aaPredicted RBP16.06■□□□□ 0.16
CLDN11-206ENST00000486429 CCDC22O60826 627 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 BGLAPP02818 100 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 FOSL1P15407 271 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 SLC25A3Q00325 362 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 ARPINQ7Z6K5 226 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 YTHDF3Q7Z739 585 aaKnown RBP16.06■□□□□ 0.16
CLDN11-206ENST00000486429 RBM45Q8IUH3 476 aaKnown RBP16.06■□□□□ 0.16
CLDN11-206ENST00000486429 UEVLDQ8IX04 471 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
CLDN11-206ENST00000486429 POU5F2Q8N7G0 328 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 WDR31Q8NA23 367 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 ADAMTS16Q8TE57 1224 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 SMAP2Q8WU79 429 aaPredicted RBP16.06■□□□□ 0.16
CLDN11-206ENST00000486429 SLC41A3Q96GZ6 507 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 LINC00470Q9BZP3 86 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 ZNF701Q9NV72 531 aaPredicted RBP16.06■□□□□ 0.16
CLDN11-206ENST00000486429 BAG5Q9UL15 447 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 MGAT4BQ9UQ53 548 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 ARID1AO14497 2285 aa16.06■□□□□ 0.16
CLDN11-206ENST00000486429 CADP27708 2225 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 TRAPPC13A5PLN9 417 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 SLC43A1O75387 559 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 UPK3AO75631 287 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 WNT11O96014 354 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 PAX1P15863 534 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 CD40P25942 277 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 SH3BGRP55822 239 aaPredicted RBP16.05■□□□□ 0.16
CLDN11-206ENST00000486429 RIPPLY3P57055 190 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 PRPS1P60891 318 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 HIKESHIQ53FT3 197 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 HMBOX1Q6NT76 420 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 SLC22A25Q6T423 547 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 PRSS57Q6UWY2 283 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 OR2T12Q8NG77 320 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 OR1K1Q8NGR3 316 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 RP9Q8TA86 221 aaKnown RBP16.05■□□□□ 0.16
CLDN11-206ENST00000486429 ZNF583Q96ND8 569 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 MOGAT1Q96PD6 335 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 C1QTNF6Q9BXI9 259 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 PCDHAC1Q9H158 963 aa16.05■□□□□ 0.16
CLDN11-206ENST00000486429 OBP2BQ9NPH6 170 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms