RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 RSPO3Q9BXY4 272 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-214ENST00000486311 TCF7L2Q9NQB0 619 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 FAM53CQ9NYF3 392 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 SLC25A37Q9NYZ2 338 aa19.55■□□□□ 0.72
SREBF1-214ENST00000486311 ARPC4-TTLL3A0A0A6YYG9 625 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 TGDSO95455 350 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 CSF3P09919 207 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 RPS5P46782 204 aaKnown RBP19.54■□□□□ 0.72
SREBF1-214ENST00000486311 UBE2NP61088 152 aaKnown RBP19.54■□□□□ 0.72
SREBF1-214ENST00000486311 BLOC1S3Q6QNY0 202 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 FUNDC1Q8IVP5 155 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 MSRB3Q8IXL7 192 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 KDM8Q8N371 416 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 LSMEM1Q8N8F7 131 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 SPATA3Q8NHX4 192 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 C10orf105Q8TEF2 133 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 KATNB1Q9BVA0 655 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 CRNNQ9UBG3 495 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-214ENST00000486311 RPS6KB2Q9UBS0 482 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 RCE1Q9Y256 329 aa19.54■□□□□ 0.72
SREBF1-214ENST00000486311 POLR3GO15318 223 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-214ENST00000486311 ZNF432O94892 652 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 F12P00748 615 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-214ENST00000486311 ARAFP10398 606 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 ZNF43P17038 809 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 GTF2E2P29084 291 aaKnown RBP19.53■□□□□ 0.72
SREBF1-214ENST00000486311 SH3BGRP55822 239 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-214ENST00000486311 VLDLRP98155 873 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 C3orf36Q3SXR2 165 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 C6orf52Q5T4I8 152 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 GCNT6Q5T4J0 391 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 HMBOX1Q6NT76 420 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 ANKRD16Q6P6B7 361 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 ANKK1Q8NFD2 765 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 PROX1Q92786 737 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 FBXO17Q96EF6 278 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 NELFAQ9H3P2 528 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 MOV10Q9HCE1 1003 aaKnown RBP19.53■□□□□ 0.72
SREBF1-214ENST00000486311 SLAMF8Q9P0V8 285 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 B3GAT1Q9P2W7 334 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 SEC14L4Q9UDX3 406 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 GMEB1Q9Y692 573 aa19.53■□□□□ 0.72
SREBF1-214ENST00000486311 RPL36A-HNRNPH2H7BZ11 118 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 OR2T1O43869 369 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 HOXB1P14653 301 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-214ENST00000486311 HTR2AP28223 471 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 IDH3AP50213 366 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 CLDN17P56750 224 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 ROR2Q01974 943 aaKnown RBP19.52■□□□□ 0.72
SREBF1-214ENST00000486311 DHRS4L2Q6PKH6 230 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 C5orf46Q6UWT4 87 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 C10orf111Q8N326 155 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 FAM169BQ8N8A8 192 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 NFKBIDQ8NI38 313 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 LRRC8CQ8TDW0 803 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 NANOS1Q8WY41 292 aaKnown RBP19.52■□□□□ 0.72
SREBF1-214ENST00000486311 SPDL1Q96EA4 605 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 OXGR1Q96P68 337 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 KCNS3Q9BQ31 491 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 SLC52A3Q9NQ40 469 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 STAB1Q9NY15 2570 aa19.52■□□□□ 0.72
SREBF1-214ENST00000486311 MXRA5Q9NR99 2828 aa19.52■□□□□ 0.71
SREBF1-214ENST00000486311 A0A096LPE4 126 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 A0A1B0GWA3 101 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 A0A1W2PPZ6 126 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 NR5A2O00482 541 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 AIM2O14862 343 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 IGLV1-44P01699 117 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 CRYAAP02489 173 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 PPIBP23284 216 aaKnown RBP19.51■□□□□ 0.71
SREBF1-214ENST00000486311 CDK6Q00534 326 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 CHRFAM7AQ494W8 412 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 FAM69AQ5T7M9 428 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 REEP3Q6NUK4 255 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 PODNL1Q6PEZ8 512 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 COMTD1Q86VU5 262 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 DNAJA4Q8WW22 397 aaPredicted RBP19.51■□□□□ 0.71
SREBF1-214ENST00000486311 SLC38A4Q969I6 547 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 TAAR8Q969N4 342 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 EBF4Q9BQW3 602 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 CCDC28BQ9BUN5 200 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 SPATA5L1Q9BVQ7 753 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 SLCO1B3Q9NPD5 702 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 CA10Q9NS85 328 aa19.51■□□□□ 0.71
SREBF1-214ENST00000486311 IGKV1D-42A0A075B6H8 117 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 TRBV5-3A0A0A0MS03 114 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 LOC102725191A0A1B0GVB3 256 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 M0R082 166 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 SLC43A1O75387 559 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 LY6HO94772 140 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 IFNA2P01563 188 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 CECR9P0C854 216 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 SERPINF1P36955 418 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 SNRPD2P62316 118 aaKnown RBP19.5■□□□□ 0.71
SREBF1-214ENST00000486311 TUBA1BP68363 451 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 TUBA4AP68366 448 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 NAAAQ02083 359 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 PAGE3Q5JUK9 113 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 TUBA1AQ71U36 451 aa19.5■□□□□ 0.71
SREBF1-214ENST00000486311 NET1Q7Z628 596 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms