RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 RNF217Q8TC41 542 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 TMEM255BQ8WV15 326 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 TMEM239Q8WW34 195 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 SLC19A3Q9BZV2 496 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 ADAM19Q9H013 955 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 Q9H521 79 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 KRT84Q9NSB2 600 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 TMEM5Q9Y2B1 443 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 ANKHD1Q8IWZ3 2542 aaKnown RBP15.25■□□□□ 0.03
VIM-205ENST00000485947 OR2M5A3KFT3 312 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 FAM221AA4D161 298 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 KDM4EB2RXH2 506 aaPredicted RBP15.24■□□□□ 0.03
VIM-205ENST00000485947 ETV2O00321 342 aaPredicted RBP15.24■□□□□ 0.03
VIM-205ENST00000485947 DLGAP1O14490 977 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 IGF2P01344 180 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 FCGR2AP12318 317 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 ZNF41P51814 821 aaPredicted RBP15.24■□□□□ 0.03
VIM-205ENST00000485947 COX10Q12887 443 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 SLC25A53Q5H9E4 307 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 PGBD2Q6P3X8 592 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 TTC33Q6PID6 262 aaPredicted RBP15.24■□□□□ 0.03
VIM-205ENST00000485947 CD300LDQ6UXZ3 194 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 GRINAQ7Z429 371 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 PARP8Q8N3A8 854 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 GTPBP8Q8N3Z3 284 aaPredicted RBP15.24■□□□□ 0.03
VIM-205ENST00000485947 GNPDA2Q8TDQ7 276 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 PAPOLBQ9NRJ5 636 aaKnown RBP15.24■□□□□ 0.03
VIM-205ENST00000485947 MED31Q9Y3C7 131 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 ZNF337Q9Y3M9 751 aa15.24■□□□□ 0.03
VIM-205ENST00000485947 PCNX3Q9H6A9 2034 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 SLC22A20A6NK97 555 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 ELOA3DA6NLF2 546 aaPredicted RBP15.23■□□□□ 0.03
VIM-205ENST00000485947 C17orf51A8MQB3 221 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 CTAG2O75638 210 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 GASTP01350 101 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 ACADSP16219 412 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 GSTM3P21266 225 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 EIF1P41567 113 aaKnown RBP15.23■□□□□ 0.03
VIM-205ENST00000485947 POLR2HP52434 150 aaKnown RBP15.23■□□□□ 0.03
VIM-205ENST00000485947 CTBP2P56545 445 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 MERTKQ12866 999 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 ELOA3BQ3SY89 546 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 WDR88Q6ZMY6 472 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 P4HA3Q7Z4N8 544 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 CDH24Q86UP0 819 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 DHRSXQ8N5I4 330 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 ELOA3Q8NG57 546 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 TMEM43Q9BTV4 400 aa15.23■□□□□ 0.03
VIM-205ENST00000485947 TUBAL3A6NHL2 446 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 EEF1E1-BLOC1S5C9J1V9 151 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 H0YAE9 185 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 MSTNO14793 375 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 EEF1E1O43324 174 aaKnown RBP15.22■□□□□ 0.03
VIM-205ENST00000485947 SNAP29O95721 258 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 EPXP11678 715 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 PRKCAP17252 672 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 ADH6P28332 368 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 TACR3P29371 465 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 OMPP47874 163 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 GSSP48637 474 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 MAP2K6P52564 334 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 KRTAP10-9P60411 292 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 PRKCDQ05655 676 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 FOXD4Q12950 439 aaPredicted RBP15.22■□□□□ 0.03
VIM-205ENST00000485947 TOMM34Q15785 309 aaPredicted RBP15.22■□□□□ 0.03
VIM-205ENST00000485947 TTC23Q5W5X9 447 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 ANKRD34AQ69YU3 496 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 C5orf46Q6UWT4 87 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 ZER1Q7Z7L7 766 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 TMEM200AQ86VY9 491 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 NRMQ8IXM6 262 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 CDK20Q8IZL9 346 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 INTS12Q96CB8 462 aaKnown RBP15.22■□□□□ 0.03
VIM-205ENST00000485947 MRGPRX4Q96LA9 322 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 NIPSNAP1Q9BPW8 284 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 KLHDC3Q9BQ90 382 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 ADI1Q9BV57 179 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 GABARAPL3Q9BY60 117 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 TOR3AQ9H497 397 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 MED17Q9NVC6 651 aa15.22■□□□□ 0.03
VIM-205ENST00000485947 A0A1W2PNV4 684 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 GMFGO60234 142 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 TNFSF13O75888 250 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 CXCR1P25024 350 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 FPR3P25089 353 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 CAPGP40121 348 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 APOBEC1P41238 236 aaKnown RBP15.21■□□□□ 0.03
VIM-205ENST00000485947 ESRRGP62508 458 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 RAC1P63000 192 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 IL1RL1Q01638 556 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 FOXF2Q12947 444 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 TSPAN31Q12999 210 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 TAF11Q15544 211 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 PLPPR5Q32ZL2 321 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 ZNF555Q8NEP9 628 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 TFAP2CQ92754 450 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 NINJ1Q92982 152 aa15.21■□□□□ 0.03
VIM-205ENST00000485947 GTPBP3Q969Y2 492 aaKnown RBP15.21■□□□□ 0.03
VIM-205ENST00000485947 DOCK7Q96N67 2140 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms