RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 RNF224P0DH78 156 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 FUT1P19526 365 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 BMP5P22003 454 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 SIRPAP78324 504 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 PMS2P3Q13401 168 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 EXOC3L2Q2M3D2 409 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 VWA1Q6PCB0 445 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 TMPRSS11FQ6ZWK6 438 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 LIX1LQ8IVB5 337 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 TUSC5Q8IXB3 177 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 CDK20Q8IZL9 346 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 CNEP1R1Q8N9A8 125 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 RELL2Q8NC24 303 aaPredicted RBP17.72■□□□□ 0.43
COL6A2-208ENST00000485591 OR9K2Q8NGE7 335 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 OR6K3Q8NGY3 331 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 DENND2DQ9H6A0 471 aaPredicted RBP17.72■□□□□ 0.43
COL6A2-208ENST00000485591 SAMHD1Q9Y3Z3 626 aaKnown RBP17.72■□□□□ 0.43
COL6A2-208ENST00000485591 AP4S1Q9Y587 144 aa17.72■□□□□ 0.43
COL6A2-208ENST00000485591 LOC102725191A0A1B0GVB3 256 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 PLPP3O14495 311 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 HIST1H2ABP04908 130 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 MAKP20794 623 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 OMPP47874 163 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 SLC25A35Q3KQZ1 300 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 HIST3H2AQ7L7L0 130 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 NANOGNBQ7Z5D8 188 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 GPAT4Q86UL3 456 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 LINC00471Q8N535 108 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 LILRB4Q8NHJ6 448 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 CA5BP1Q8WTZ4 195 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 HIST1H2ACQ93077 130 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 STARD4Q96DR4 205 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 OXGR1Q96P68 337 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 PIGMQ9H3S5 423 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 FANCFQ9NPI8 374 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 B3GAT1Q9P2W7 334 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 DNAJB9Q9UBS3 223 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 FLVCR1Q9Y5Y0 555 aa17.71■□□□□ 0.43
COL6A2-208ENST00000485591 EFCAB9A8MZ26 197 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 MS4A18H0YCH9 400 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 GNGT2O14610 69 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 TIPRLO75663 272 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 CLDN14O95500 239 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 TSPAN19P0C672 248 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 SAGP10523 405 aaPredicted RBP17.7■□□□□ 0.42
COL6A2-208ENST00000485591 GPR4P46093 362 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 SLC9A3P48764 834 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 PUDPQ08623 228 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 ZP4Q12836 540 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 CDSNQ15517 529 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 MS4A18Q3C1V0 323 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 BTLAQ7Z6A9 289 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 C10orf67Q8IYJ2 551 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 FAM46AQ96IP4 442 aaKnown RBP17.7■□□□□ 0.42
COL6A2-208ENST00000485591 U3KQV3 271 aa17.7■□□□□ 0.42
COL6A2-208ENST00000485591 HNRNPRO43390 633 aaKnown RBP17.69■□□□□ 0.42
COL6A2-208ENST00000485591 OR10H3O60404 316 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 DEAF1O75398 565 aaPredicted RBP17.69■□□□□ 0.42
COL6A2-208ENST00000485591 OR6A2O95222 327 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 HPRP00739 348 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 CGAP01215 116 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 ADORA3P0DMS8 318 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 CD8BP10966 210 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 FCGR1AP12314 374 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 UQCRC1P31930 480 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 IFNGR2P38484 337 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 RPS4XP62701 263 aaKnown RBP17.69■□□□□ 0.42
COL6A2-208ENST00000485591 ANKDD1AQ495B1 522 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 ZFP1Q6P2D0 407 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 CREB3L2Q70SY1 520 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 NUFIP2Q7Z417 695 aaKnown RBP17.69■□□□□ 0.42
COL6A2-208ENST00000485591 GALNT5Q7Z7M9 940 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 MEX3DQ86XN8 651 aaKnown RBP17.69■□□□□ 0.42
COL6A2-208ENST00000485591 KDM8Q8N371 416 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 TMEM45BQ96B21 275 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 TAS2R5Q9NYW4 299 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 JKAMPQ9P055 326 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 PROCRQ9UNN8 238 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 HIF3AQ9Y2N7 669 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 NOSIPQ9Y314 301 aaKnown RBP17.69■□□□□ 0.42
COL6A2-208ENST00000485591 NOX1Q9Y5S8 564 aa17.69■□□□□ 0.42
COL6A2-208ENST00000485591 CACNA1CQ13936 2221 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 FAM90A27PA6NNH2 459 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 CDC42EP2O14613 210 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 MSTNO14793 375 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 CLOCKO15516 846 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 KLF4O43474 513 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 CCNB2O95067 398 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 ZNF43P17038 809 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 DNAJA1P31689 397 aaKnown RBP17.68■□□□□ 0.42
COL6A2-208ENST00000485591 HCFC1P51610 2035 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 IL1RL1Q01638 556 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 RPL18Q07020 188 aaKnown RBP17.68■□□□□ 0.42
COL6A2-208ENST00000485591 PPP1R8Q12972 351 aaKnown RBP17.68■□□□□ 0.42
COL6A2-208ENST00000485591 ATP6AP1Q15904 470 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 MICAQ29983 383 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 ZNF770Q6IQ21 691 aaPredicted RBP17.68■□□□□ 0.42
COL6A2-208ENST00000485591 C1orf94Q6P1W5 598 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 PXKQ7Z7A4 578 aa17.68■□□□□ 0.42
COL6A2-208ENST00000485591 ZER1Q7Z7L7 766 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms