RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 LPAR3Q9UBY5 353 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 SEC14L4Q9UDX3 406 aa16.73■□□□□ 0.27
COL27A1-205ENST00000485397 MALRD1Q5VYJ5 2156 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 ARPC4-TTLL3A0A0A6YYG9 625 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 IGHV4-61A0A0C4DH41 118 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 SLC35F4A4IF30 521 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 OR6C65A6NJZ3 312 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 B9A039 149 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 SLCO1B7G3V0H7 640 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 OR4A8P0C604 315 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 IGFBP5P24593 272 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 CALCRP30988 508 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 RPS5P46782 204 aaKnown RBP16.72■□□□□ 0.27
COL27A1-205ENST00000485397 CLDN17P56750 224 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 ROR2Q01974 943 aaKnown RBP16.72■□□□□ 0.27
COL27A1-205ENST00000485397 ADIPOQQ15848 244 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 C6orf10Q5SRN2 563 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 IL17RELQ6ZVW7 336 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 MAGEE2Q8TD90 523 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-205ENST00000485397 MAL2Q969L2 176 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 KTI12Q96EK9 354 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-205ENST00000485397 OR52B2Q96RD2 323 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 LINC00470Q9BZP3 86 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 CHODLQ9H9P2 273 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 CACYBPQ9HB71 228 aaKnown RBP16.72■□□□□ 0.27
COL27A1-205ENST00000485397 SDR39U1Q9NRG7 319 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-205ENST00000485397 RAB21Q9UL25 225 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 IFT52Q9Y366 437 aa16.72■□□□□ 0.27
COL27A1-205ENST00000485397 LOC100289279A0A1B0GTE1 492 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 TMEM247A6NEH6 219 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 NDUFS8O00217 210 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 IGLV1-44P01699 117 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 CELA3BP08861 270 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 POLR2JP52435 117 aaKnown RBP16.71■□□□□ 0.27
COL27A1-205ENST00000485397 ARF1P84077 181 aaKnown RBP16.71■□□□□ 0.27
COL27A1-205ENST00000485397 MSANTD1Q6ZTZ1 278 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 MYPOPQ86VE0 399 aaPredicted RBP16.71■□□□□ 0.27
COL27A1-205ENST00000485397 MSI2Q96DH6 328 aaKnown RBP16.71■□□□□ 0.27
COL27A1-205ENST00000485397 RSPO3Q9BXY4 272 aaPredicted RBP16.71■□□□□ 0.27
COL27A1-205ENST00000485397 ARMC7Q9H6L4 198 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 PCDHB14Q9Y5E9 798 aa16.71■□□□□ 0.27
COL27A1-205ENST00000485397 UBDO15205 165 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF432O94892 652 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 APEHP13798 732 aaKnown RBP16.7■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF43P17038 809 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 PAX7P23759 505 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 HGFACQ04756 655 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 RGNQ15493 299 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 EFNB3Q15768 340 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 KRTAP24-1Q3LI83 254 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 SLC2A7Q6PXP3 512 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 CROCCP2Q86T23 111 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 GTF2H4Q92759 462 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF837Q96EG3 531 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF317Q96PQ6 595 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-205ENST00000485397 PAIP1Q9H074 479 aaKnown RBP16.7■□□□□ 0.26
COL27A1-205ENST00000485397 PLK3Q9H4B4 646 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 BCL2L10Q9HD36 194 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 THUMPD1Q9NXG2 353 aaKnown RBP16.7■□□□□ 0.26
COL27A1-205ENST00000485397 B3GAT1Q9P2W7 334 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 KCNS2Q9ULS6 477 aa16.7■□□□□ 0.26
COL27A1-205ENST00000485397 LOC390937A0A1W2PQ73 354 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 RPL36A-HNRNPH2H7BZ11 118 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 CLIC1O00299 241 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 PDE5AO76074 875 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 IGKV3-15P01624 115 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 HOXB1P14653 301 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-205ENST00000485397 GTF2E2P29084 291 aaKnown RBP16.69■□□□□ 0.26
COL27A1-205ENST00000485397 SRSF2Q01130 221 aaKnown RBP16.69■□□□□ 0.26
COL27A1-205ENST00000485397 C3orf36Q3SXR2 165 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 IQCCQ4KMZ1 466 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 MIER2Q8N344 545 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 OR4F15Q8NGB8 312 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 BBS10Q8TAM1 723 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 TAAR8Q969N4 342 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 OXGR1Q96P68 337 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 A4GALTQ9NPC4 353 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 RCE1Q9Y256 329 aa16.69■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF503-AS2A6NEH8 195 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 M0R082 166 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 SLC43A1O75387 559 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 BMP2P12643 396 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 CBR1P16152 277 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 SRD5A1P18405 259 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 CBLP22681 906 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 HTR2AP28223 471 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 THBS4P35443 961 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 IDH3GP51553 393 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-205ENST00000485397 SH3BGRP55822 239 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-205ENST00000485397 FAM120AOSQ5T036 256 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 COMTD1Q86VU5 262 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 FAM169BQ8N8A8 192 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF417Q8TAU3 575 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 SLC35B4Q969S0 331 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 ZNF587Q96SQ5 575 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-205ENST00000485397 BPESC1Q9GZL8 116 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 GPR35Q9HC97 309 aa16.68■□□□□ 0.26
COL27A1-205ENST00000485397 MYOZ1Q9NP98 299 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-205ENST00000485397 RPS6KB2Q9UBS0 482 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms