RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 HTR2AP28223 471 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 IFNA8P32881 189 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 CDKN1AP38936 164 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 SLC7A2P52569 658 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 CRYBA2P53672 197 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 OR2B6P58173 313 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 PSME3P61289 254 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 P2RY6Q15077 328 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 OR1Q1Q15612 314 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 GLIPR1L2Q4G1C9 344 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 FAM69AQ5T7M9 428 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 C16orf89Q6UX73 402 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 LINC00114Q6XXX2 140 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 STAC2Q6ZMT1 411 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 TUSC5Q8IXB3 177 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 PGAM4Q8N0Y7 254 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 ARHGAP24Q8N264 748 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 GPR32P1Q8NGA4 272 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM158Q8WZ71 300 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 MCHR1Q99705 422 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 OR11A1Q9GZK7 315 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-213ENST00000484112 ING1Q9UK53 422 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-213ENST00000484112 RASD1Q9Y272 281 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 GPR52Q9Y2T5 361 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 CORINQ9Y5Q5 1042 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 USF3Q68DE3 2245 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 TRAV36DV7A0A075B6V5 113 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 LOC102725191A0A1B0GVB3 256 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 ZC3H12DA2A288 527 aaKnown RBP8.83□□□□□ -1
CPSF4-213ENST00000484112 TRAPPC13A5PLN9 417 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 OR6C65A6NJZ3 312 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 AQP7P3A6NL99 342 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 CCT8L1PA6NM43 557 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 ZNF716A6NP11 495 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 FTCDNL1E5RQL4 147 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 CXCR6O00574 342 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 NME4O00746 187 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 GSTA4O15217 222 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 TMCC2O75069 709 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 GMNNO75496 209 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 MT-ATP6P00846 226 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 OPN1SWP03999 348 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 HSD17B1P14061 328 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 CCNA2P20248 432 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 PSMB1P20618 241 aaKnown RBP8.83□□□□□ -1
CPSF4-213ENST00000484112 GTF2E2P29084 291 aaKnown RBP8.83□□□□□ -1
CPSF4-213ENST00000484112 ACVR1BP36896 505 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 RBM34P42696 430 aaKnown RBP8.83□□□□□ -1
CPSF4-213ENST00000484112 OR3A2P47893 321 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 GSK3BP49841 420 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 EGR4Q05215 589 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 FAPQ12884 760 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 CEACAM7Q14002 265 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 FXNQ16595 210 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 CYBRD1Q53TN4 286 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 ENTPD8Q5MY95 495 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 TFAP2EQ6VUC0 442 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 Q6ZT83 130 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 COMTD1Q86VU5 262 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 HIPK1Q86Z02 1210 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 SCAIQ8N9R8 606 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 ADPRHL1Q8NDY3 354 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 OR6T1Q8NGN1 323 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 ADAMTS16Q8TE57 1224 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 POP5Q969H6 163 aaKnown RBP8.83□□□□□ -1
CPSF4-213ENST00000484112 TMEM45BQ96B21 275 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 KCTD14Q9BQ13 255 aaPredicted RBP8.83□□□□□ -1
CPSF4-213ENST00000484112 TMEM204Q9BSN7 226 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 C12orf49Q9H741 205 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 RPS6KA6Q9UK32 745 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 B3GALT5Q9Y2C3 310 aa8.83□□□□□ -1
CPSF4-213ENST00000484112 TLN2Q9Y4G6 2542 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 IGHV3-15A0A0B4J1V0 119 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 M0R3H8 397 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 TLX2O43763 284 aaPredicted RBP8.82□□□□□ -1
CPSF4-213ENST00000484112 CD5LO43866 347 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 TPST2O60704 377 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 MRPL33O75394 65 aaKnown RBP8.82□□□□□ -1
CPSF4-213ENST00000484112 OR5F1O95221 314 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 SOD3P08294 240 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 GGT1P19440 569 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 CALB2P22676 271 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 CDH12P55289 794 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 HOXC5Q00444 222 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 SLC17A1Q14916 467 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 OR7A5Q15622 319 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 TSC22D1Q15714 1073 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 CHRFAM7AQ494W8 412 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 LRRC23Q53EV4 343 aaPredicted RBP8.82□□□□□ -1
CPSF4-213ENST00000484112 SAMD4BQ5PRF9 694 aaKnown RBP8.82□□□□□ -1
CPSF4-213ENST00000484112 OTUD3Q5T2D3 398 aaPredicted RBP8.82□□□□□ -1
CPSF4-213ENST00000484112 TMEM225Q6GV28 225 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 CBLL1Q75N03 491 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 CARM1Q86X55 608 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 GABRG1Q8N1C3 465 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 FITM2Q8N6M3 262 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 STEAP2Q8NFT2 490 aa8.82□□□□□ -1
CPSF4-213ENST00000484112 LILRB1Q8NHL6 650 aaPredicted RBP8.82□□□□□ -1
CPSF4-213ENST00000484112 SMAP2Q8WU79 429 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms