RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 M0R129 80 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 MYL12BO14950 172 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SLC22A1O15245 554 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PRODHO43272 600 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 LRRTM2O43300 516 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 KLF4O43474 513 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PRKYO43930 277 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PIP5K1CO60331 668 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CDC40O60508 579 aaKnown RBP eCLIP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZG16O60844 167 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZFAND5O76080 213 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 BCL10O95999 233 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 IFNGP01579 166 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NGFRP08138 427 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 STSP08842 583 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CELA3AP09093 270 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 DBTP11182 482 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 MYL12AP19105 171 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 C21orf33P30042 268 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SLC6A6P31641 620 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 GRK5P34947 590 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ACAA2P42765 397 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 MAP2K4P45985 399 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SLC9A3P48764 834 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TMED10P49755 219 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ROR2Q01974 943 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF91Q05481 1191 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CRYZQ08257 329 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 GTF3C1Q12789 2109 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TIGD6Q17RP2 521 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PGGHGQ32M88 737 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ELOA3BQ3SY89 546 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TIMM50Q3ZCQ8 353 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CLEC12AQ5QGZ9 265 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ACSM5Q6NUN0 579 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 RPUSD3Q6P087 351 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SMARCD3Q6STE5 483 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 RTL4Q6ZR62 310 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 FGD2Q7Z6J4 655 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 OAFQ86UD1 273 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 P2RY8Q86VZ1 359 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 LSRQ86X29 649 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 KIF18BQ86Y91 864 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 MISPQ8IVT2 679 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 POGLUT1Q8NBL1 392 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ST6GALNAC3Q8NDV1 305 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PSD4Q8NDX1 1056 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ELOA3Q8NG57 546 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 OR9Q1Q8NGQ5 310 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NUBPLQ8TB37 319 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZFAND2BQ8WV99 257 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ASB15Q8WXK1 588 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 OMA1Q96E52 524 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SGTBQ96EQ0 304 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SAMD8Q96LT4 415 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 GPA33Q99795 319 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 FUNDC2Q9BWH2 189 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 MND1Q9BWT6 205 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CDCA4Q9BXL8 241 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PLA2G12AQ9BZM1 189 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SLC19A3Q9BZV2 496 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 LAT2Q9GZY6 243 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 OR52D1Q9H346 318 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 HHATLQ9HCP6 504 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TIMMDC1Q9NPL8 285 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 HPF1Q9NWY4 346 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ENPP5Q9UJA9 477 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 POLEQ07864 2286 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 MED12Q93074 2177 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 CELSR2Q9HCU4 2923 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 A0A087WUJ7 227 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 TRGV8A0A0C4DH27 118 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 OR6C70A6NIJ9 312 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ENO4A6NNW6 628 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 SURF4O15260 269 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 EIF4E2O60573 245 aaKnown RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 TSPAN2O60636 221 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 BCAS1O75363 584 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 LYPD3O95274 346 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 RAB36O95755 333 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 CLDN1O95832 211 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ADORA3P0DMS8 318 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 EDN3P14138 238 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 CD36P16671 472 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF24P17028 368 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 PGCP20142 388 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 MAKP20794 623 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 PAICSP22234 425 aaKnown RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ABCD3P28288 659 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 NOS3P29474 1203 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 ATP6V1E1P36543 226 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 SLC15A1P46059 708 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 SERPINB10P48595 397 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 MASP1P48740 699 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 CLK1P49759 484 aaKnown RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 GP2P55259 537 aaKnown RBP6.27□□□□□ -1.41
BRCA1-216ENST00000484087 CDH11P55287 796 aa6.27□□□□□ -1.41
BRCA1-216ENST00000484087 FBXW4P57775 412 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms