RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 POTEKPQ9BYX7 375 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 ISYNA1Q9NPH2 558 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 TNFRSF10DQ9UBN6 386 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 A0A087WZY1 265 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 LOC101059948A0A1B0GTJ6 334 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 ZC3H12DA2A288 527 aaKnown RBP23.73■■□□□ 1.39
SHOX2-204ENST00000483851 J3QRE1 110 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 ATP6V1E1P36543 226 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 EIF1P41567 113 aaKnown RBP23.73■■□□□ 1.39
SHOX2-204ENST00000483851 RPL18Q07020 188 aaKnown RBP23.73■■□□□ 1.39
SHOX2-204ENST00000483851 IL10RAQ13651 578 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 TIMM50Q3ZCQ8 353 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 ARSKQ6UWY0 536 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 OR5J2Q8NH18 312 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 ADAMTS17Q8TE56 1095 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 DDIT4LQ96D03 193 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 CHCHD6Q9BRQ6 235 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 INPP5EQ9NRR6 644 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 ADAM18Q9Y3Q7 739 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 LOC100506127A0A0U1RQW1 187 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 SDHAP31040 664 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 ETV1P50549 477 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 LGALS3BPQ08380 585 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 MLLT11Q13015 90 aaPredicted RBP23.73■■□□□ 1.39
SHOX2-204ENST00000483851 FCRLBQ6BAA4 426 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 PLCZ1Q86YW0 608 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 WDSUB1Q8N9V3 476 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 OR4K17Q8NGC6 315 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 OR4K13Q8NH42 304 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 MFSD8Q8NHS3 518 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 KISS1RQ969F8 398 aaPredicted RBP23.73■■□□□ 1.39
SHOX2-204ENST00000483851 DDOQ99489 341 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 HCAR1Q9BXC0 346 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 MROQ9BYG7 248 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 SERINC1Q9NRX5 453 aa23.73■■□□□ 1.39
SHOX2-204ENST00000483851 SPIN1Q9Y657 262 aaPredicted RBP23.73■■□□□ 1.39
SHOX2-204ENST00000483851 CCDC182A6NF36 153 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 SNX4O95219 450 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 WNT4P56705 351 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 CTXN1P60606 82 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 FOXF1Q12946 379 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 SLC35D3Q5M8T2 416 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 IGF2-ASQ6U949 168 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 NKD1Q969G9 470 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 C1GALT1C1Q96EU7 318 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 MED20Q9H944 212 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 MRPL39Q9NYK5 338 aaKnown RBP23.72■■□□□ 1.39
SHOX2-204ENST00000483851 VDAC3Q9Y277 283 aa23.72■■□□□ 1.39
SHOX2-204ENST00000483851 GPX5O75715 221 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 DXOO77932 396 aaKnown RBP23.71■■□□□ 1.39
SHOX2-204ENST00000483851 LIMS3P0CW19 117 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 LIMS4P0CW20 117 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 RBMS1P29558 406 aaKnown RBP23.71■■□□□ 1.39
SHOX2-204ENST00000483851 ERVK-25P63136 954 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 GABREP78334 506 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 OXA1LQ15070 435 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 KLHL12Q53G59 568 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 C1QL3Q5VWW1 255 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 NPEPL1Q8NDH3 523 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 ZBTB8AQ96BR9 441 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 ASPNQ9BXN1 380 aa23.71■■□□□ 1.39
SHOX2-204ENST00000483851 CDRT15L2A8MXV6 281 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 FTCDNL1E5RQL4 147 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 FZD7O75084 574 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 WISP1O95388 367 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 OCM2P0CE71 109 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 OCMP0CE72 109 aaPredicted RBP23.7■■□□□ 1.39
SHOX2-204ENST00000483851 CEACAM1P13688 526 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.7■■□□□ 1.39
SHOX2-204ENST00000483851 LCN1P1Q5VSP4 162 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 ACBD7Q8N6N7 88 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 SCAIQ8N9R8 606 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 OR4F15Q8NGB8 312 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 NMNAT2Q9BZQ4 307 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 TAS2R5Q9NYW4 299 aa23.7■■□□□ 1.39
SHOX2-204ENST00000483851 PPP5CP53041 499 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 GXYLT1Q4G148 440 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 ACER2Q5QJU3 275 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 TUBA3EQ6PEY2 450 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 CYB561A3Q8NBI2 242 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 SDR9C7Q8NEX9 313 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 OR52N1Q8NH53 320 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 TMEM41AQ96HV5 264 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 OR51V1Q9H2C8 321 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 KLHL1Q9NR64 748 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 GRHPRQ9UBQ7 328 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 HRH3Q9Y5N1 445 aa23.7■■□□□ 1.38
SHOX2-204ENST00000483851 EP300Q09472 2414 aaPredicted RBP23.7■■□□□ 1.38
SHOX2-204ENST00000483851 PROB1E7EW31 1015 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 SNPHO15079 494 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 CCL3P10147 92 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 CD40LGP29965 261 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 SLC25A1P53007 311 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 RPS7P62081 194 aaKnown RBP23.69■■□□□ 1.38
SHOX2-204ENST00000483851 ATP1A4Q13733 1029 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 PRAMEF20Q5VT98 475 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 GDPGP1Q6ZNW5 385 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 DTX1Q86Y01 620 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 OR51G2Q8NGK0 314 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 SLC25A43Q8WUT9 341 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms