RNA–Protein interactions for RNA: ENST00000483789.5

CCNL1-224, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 667 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-224ENST00000483789 LINC00471Q8N535 108 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 OR52B6Q8NGF0 335 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 SPSB1Q96BD6 273 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 LINGO1Q96FE5 620 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 CEP19Q96LK0 163 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 HYLS1Q96M11 299 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 MGLLQ99685 303 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 SEMA3CQ99985 751 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 MARVELD1Q9BSK0 173 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 PCGF1Q9BSM1 259 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 INPP5KQ9BT40 448 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 DOHHQ9BU89 302 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 CACNG6Q9BXT2 260 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 C6orf62Q9GZU0 229 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 TMEM38AQ9H6F2 299 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 NT5DC2Q9H857 520 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 RNF121Q9H920 327 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 MKKSQ9NPJ1 570 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 RPRD1BQ9NQG5 326 aaKnown RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 POLE4Q9NR33 117 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 DDX28Q9NUL7 540 aaKnown RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 MED9Q9NWA0 146 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 THUMPD1Q9NXG2 353 aaKnown RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 ZNF226Q9NYT6 803 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 EIF3KQ9UBQ5 218 aaKnown RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 RAB23Q9ULC3 237 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 SNX6Q9UNH7 406 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 LSM2Q9Y333 95 aaKnown RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 RBMX2Q9Y388 322 aaKnown RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 SAMHD1Q9Y3Z3 626 aaKnown RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 POLR3HQ9Y535 204 aaPredicted RBP3.12□□□□□ -1.91
CCNL1-224ENST00000483789 PTPRDP23468 1912 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 DSPPQ9NZW4 1301 aa3.12□□□□□ -1.91
CCNL1-224ENST00000483789 BRCA1P38398 1863 aaKnown RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 PLXNA3P51805 1871 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 A0A0U1RQS6 177 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 A0A1B0GTQ1 180 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SMIM30A4D0T7 59 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 CCDC182A6NF36 153 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ANKRD61A6NGH8 418 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 OR51F1A6NGY5 319 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ANKRD66B4E2M5 251 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 TMEM189-UBE2V1I3L0A0 370 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SGK494L7N484 410 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 TNFRSF11BO00300 401 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 RFXANKO14593 260 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 KDELR3O43731 214 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 GPX5O75715 221 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 STK16O75716 305 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 CLDN9O95484 217 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SNAI1O95863 264 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 PTHP01270 115 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 PGK2P07205 417 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 STSP08842 583 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ZDHHC11BP0C7U3 371 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 DANCRP0C864 163 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 MPC1LP0DKB6 136 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SMIM10L2AP0DMW4 78 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SMIM10L2BP0DMW5 78 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 HAPLN1P10915 354 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 DPEP1P16444 411 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ZNF7P17097 686 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 CBLP22681 906 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 PSMA1P25786 263 aaKnown RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 CD27P26842 260 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ALDH4A1P30038 563 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 FGF9P31371 208 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 TIA1P31483 386 aaKnown RBP eCLIP3.11□□□□□ -1.915e-7■■■■□ 19.7
CCNL1-224ENST00000483789 CRYBB2P43320 205 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 XCR1P46094 333 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ASMTP46597 345 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SLC6A12P48065 614 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 CSNK1DP48730 415 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SLC9A3P48764 834 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 HNMTP50135 292 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 LUMP51884 338 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 CLDN20P56880 219 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SMIM11AP58511 58 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 CDC42P60953 191 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SRP54P61011 504 aaKnown RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ST8SIA6P61647 398 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 LSM3P62310 102 aaKnown RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 PPP3R1P63098 170 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 RPL38P63173 70 aaKnown RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 HTD2P86397 168 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 VLDLRP98155 873 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ST3GAL4Q11206 333 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SMARCB1Q12824 385 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 COX10Q12887 443 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 MAB21L1Q13394 359 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ILKQ13418 452 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 DGCR6Q14129 220 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 VGLL4Q14135 290 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ZNF235Q14590 738 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 QPRTQ15274 297 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SF3A2Q15428 464 aaKnown RBP3.11□□□□□ -1.91
CCNL1-224ENST00000483789 ZNF79Q15937 498 aa3.11□□□□□ -1.91
CCNL1-224ENST00000483789 SSX1Q16384 188 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms