RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SERTAD2Q14140 314 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 RPE65Q16518 533 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 BOLLQ8N9W6 283 aaKnown RBP13.12□□□□□ -0.31
COL9A2-207ENST00000482722 OR52L1Q8NGH7 329 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 OR6K3Q8NGY3 331 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 CDS1Q92903 461 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 SLC25A28Q96A46 364 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 SLC35A4Q96G79 324 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 UTP23Q9BRU9 249 aaKnown RBP13.12□□□□□ -0.31
COL9A2-207ENST00000482722 SIDT1Q9NXL6 827 aaKnown RBP13.12□□□□□ -0.31
COL9A2-207ENST00000482722 CYB5R1Q9UHQ9 305 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 SLC22A31A6NKX4 558 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 F5H5P2 479 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF749O43361 778 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ADAM11O75078 769 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ACHEP22303 614 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ADH7P40394 386 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 P2RX1P51575 399 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 RPS15P62841 145 aaKnown RBP13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ID2Q02363 134 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 OR56A1Q8NGH5 318 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ZCCHC10Q8TBK6 192 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 CD180Q99467 661 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 GFI1Q99684 422 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 PDCD1LG2Q9BQ51 273 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 SLC25A18Q9H1K4 315 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 SLC39A1Q9NY26 324 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.12□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF780BQ9Y6R6 833 aa13.12□□□□□ -0.31
COL9A2-207ENST00000482722 UBE2QL1A1L167 161 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 EMC8O43402 210 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 MEOX2P50222 304 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 ART1P52961 327 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 RPS11P62280 158 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL9A2-207ENST00000482722 SORDQ00796 357 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 FOXK2Q01167 660 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 IL10RAQ13651 578 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 CRMP1Q14194 572 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 CST6Q15828 149 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 FAM111BQ6SJ93 734 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 RD3Q7Z3Z2 195 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 DNAAF1Q8NEP3 725 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 OR4E2Q8NGC2 313 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 BARX1Q9HBU1 254 aaPredicted RBP13.11□□□□□ -0.31
COL9A2-207ENST00000482722 CAPN10Q9HC96 672 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 THAP10Q9P2Z0 257 aaPredicted RBP13.11□□□□□ -0.31
COL9A2-207ENST00000482722 APOBEC3BQ9UH17 382 aaKnown RBP13.11□□□□□ -0.31
COL9A2-207ENST00000482722 H0Y8X5 98 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 GPR31O00270 319 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 SERPINA3P01011 423 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 LAMP2P13473 410 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 RAB13P51153 203 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 AGBL4Q5VU57 503 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 SLC48A1Q6P1K1 146 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 OVCH1Q7RTY7 1134 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF433Q8N7K0 673 aaPredicted RBP13.11□□□□□ -0.31
COL9A2-207ENST00000482722 OR2L5Q8NG80 312 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 STK35Q8TDR2 534 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 NRIP3Q9NQ35 241 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 POT1Q9NUX5 634 aa13.11□□□□□ -0.31
COL9A2-207ENST00000482722 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
COL9A2-207ENST00000482722 PSMD9O00233 223 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 F3P13726 295 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 DPP4P27487 766 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 MECP2P51608 486 aaKnown RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 TRA2BP62995 288 aaKnown RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 TMEM35AQ53FP2 167 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 MTSS1LQ765P7 747 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 RTL10Q7L3V2 364 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 SLC36A1Q7Z2H8 476 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 OR2AK2Q8NG84 335 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 OR2L3Q8NG85 312 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 C1orf216Q8TAB5 229 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 ZMYND19Q96E35 227 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 GDE1Q9NZC3 331 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 CTSFQ9UBX1 484 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF443Q9Y2A4 671 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 APOC1P02654 83 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 RLN1P04808 185 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 GLAP06280 429 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 PSMB10P40306 273 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 NAA10P41227 235 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 GMFBP60983 142 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 CBFBQ13951 182 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF836Q6ZNA1 936 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 TMEM17Q86X19 198 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 MUC20Q8N307 709 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 LNX2Q8N448 690 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 HS6ST2Q96MM7 605 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 HDAC8Q9BY41 377 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 CLDND1Q9NY35 253 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 RASL12Q9NYN1 266 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 CLEC1BQ9P126 229 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms