RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ARMCX4Q5H9R4 360 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 GKAP1Q5VSY0 366 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-224ENST00000481929 PRAMEF8Q5VWM4 474 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 PRAMEF7Q5VXH5 474 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 AP1ARQ63HQ0 302 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 SAXO2Q658L1 398 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 LEG1Q6P5S2 330 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 RNF165Q6ZSG1 346 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 HMGN2P46Q86SG4 172 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 LRP11Q86VZ4 500 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 EPHX4Q8IUS5 362 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 CNOT9Q92600 299 aaKnown RBP12.77□□□□□ -0.37
HDAC6-224ENST00000481929 CCT8L2Q96SF2 557 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 PRPF18Q99633 342 aaKnown RBP12.77□□□□□ -0.37
HDAC6-224ENST00000481929 MMP27Q9H306 513 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 ADPRHL2Q9NX46 363 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 FZR1Q9UM11 496 aa12.77□□□□□ -0.37
HDAC6-224ENST00000481929 A0A087WUV0 522 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-224ENST00000481929 RNF103-CHMP3A0A140T963 221 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 EXOC1LA0A1B0GW35 172 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 AZIN1O14977 448 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 AGR2O95994 175 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 CHRM4P08173 479 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 UQCRBP14927 111 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 CXCR1P25024 350 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 RAD52P43351 418 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 MAGEB1P43366 347 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 P2RY4P51582 365 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 HBA1P69905 142 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 GALK2Q01415 458 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 SLC7A5Q01650 507 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 NKPD1Q17RQ9 610 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 CEACAM16Q2WEN9 425 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 FRRS1Q6ZNA5 592 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 RETREG3Q86VR2 466 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 GPR137CQ8N3F9 429 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 MGARPQ8TDB4 240 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 POP5Q969H6 163 aaKnown RBP12.76□□□□□ -0.37
HDAC6-224ENST00000481929 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 OR51I1Q9H343 314 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 TUBB1Q9H4B7 451 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF69Q9UC07 566 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 DUSP13Q9UII6 198 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 NUP50Q9UKX7 468 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 RCE1Q9Y256 329 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 RASD1Q9Y272 281 aa12.76□□□□□ -0.37
HDAC6-224ENST00000481929 CLDN25C9JDP6 229 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 CLDN34H7C241 214 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 M0QZ24 198 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 FAAHO00519 579 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 SLC43A1O75387 559 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 SEC14L2O76054 403 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 OR12D1P0DN82 309 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF35P13682 527 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 DNAJB13P59910 316 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 HPCAP84074 193 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 TEKQ02763 1124 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 PTGR1Q14914 329 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 GSG1Q2KHT4 349 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 ALKBH6Q3KRA9 238 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 FBLN7Q53RD9 439 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 C17orf107Q6ZR85 190 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 DDIASQ8IXT1 998 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 CLEC4FQ8N1N0 589 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 KIF18AQ8NI77 898 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 ACMSDQ8TDX5 336 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 XAGE5Q8WWM1 108 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 TAF15Q92804 592 aaKnown RBP eCLIP12.75□□□□□ -0.37
HDAC6-224ENST00000481929 ROPN1LQ96C74 230 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 COQ8BQ96D53 544 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 ZG16BQ96DA0 208 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 TSPYL1Q9H0U9 437 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 PLEK2Q9NYT0 353 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 PDP1Q9P0J1 537 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-224ENST00000481929 EMCNQ9ULC0 261 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 WIPI2Q9Y4P8 454 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 MMP24Q9Y5R2 645 aa12.75□□□□□ -0.37
HDAC6-224ENST00000481929 FRS3O43559 492 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 LYPLA1O75608 230 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-224ENST00000481929 KNG1P01042 644 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 HLA-HP01893 362 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 CD79AP11912 226 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 ATP4BP51164 291 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 CLDN17P56750 224 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 CCL8P80075 99 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 LCN2P80188 198 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 FXNQ16595 210 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 CMIPQ8IY22 773 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 MIPOL1Q8TD10 442 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 WFDC12Q8WWY7 111 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 TMIGD2Q96BF3 282 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 ZNF837Q96EG3 531 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-224ENST00000481929 TIMD4Q96H15 378 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 GAL3ST1Q99999 423 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 DUSP26Q9BV47 211 aa12.74□□□□□ -0.37
HDAC6-224ENST00000481929 B3GNT2Q9NY97 397 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms