RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 C10orf53Q8N6V4 93 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 WDR31Q8NA23 367 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 C1orf162Q8NEQ5 155 aaPredicted RBP7.9□□□□□ -1.14
LINC00544-202ENST00000481738 OR6S1Q8NH40 331 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 RP9Q8TA86 221 aaKnown RBP7.9□□□□□ -1.14
LINC00544-202ENST00000481738 RASSF5Q8WWW0 418 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 FBXW5Q969U6 566 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 RCN3Q96D15 328 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 ZNF583Q96ND8 569 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 OXGR1Q96P68 337 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 ALKBH3Q96Q83 286 aaPredicted RBP7.9□□□□□ -1.14
LINC00544-202ENST00000481738 TMEM43Q9BTV4 400 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 C1QTNF6Q9BXI9 259 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 AMBRA1Q9C0C7 1298 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 SLC17A5Q9NRA2 495 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 B3GAT1Q9P2W7 334 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 B3GALT5Q9Y2C3 310 aa7.9□□□□□ -1.14
LINC00544-202ENST00000481738 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.15
LINC00544-202ENST00000481738 CSMD1Q96PZ7 3565 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 TRAPPC13A5PLN9 417 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 FAM220BPB1ANY3 271 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 SHISA9B4DS77 424 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 ZNF587BE7ETH6 402 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 LRRN3E7EW58 273 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 ABCD4O14678 606 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 CHP2O43745 196 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 CCDC22O60826 627 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 HPRP00739 348 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 THY1P04216 161 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 COX4I1P13073 169 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 NQO1P15559 274 aaKnown RBP7.89□□□□□ -1.15
LINC00544-202ENST00000481738 TNFRSF1BP20333 461 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 PTH2RP49190 550 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 SEC24CP53992 1094 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 SLC25A3Q00325 362 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 SPOCK1Q08629 439 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 VEZF1Q14119 521 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 MFSD13AQ14CX5 517 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 ZNF672Q499Z4 452 aaPredicted RBP7.89□□□□□ -1.15
LINC00544-202ENST00000481738 HIKESHIQ53FT3 197 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 SWT1Q5T5J6 900 aaKnown RBP7.89□□□□□ -1.15
LINC00544-202ENST00000481738 KLHL17Q6TDP4 642 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 KLHL24Q6TFL4 600 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 TMEM108Q6UXF1 575 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 LINC00114Q6XXX2 140 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 WDR88Q6ZMY6 472 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 H1FNTQ75WM6 255 aaPredicted RBP7.89□□□□□ -1.15
LINC00544-202ENST00000481738 LINGO2Q7L985 606 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 TSPYL5Q86VY4 417 aaPredicted RBP7.89□□□□□ -1.15
LINC00544-202ENST00000481738 CARM1Q86X55 608 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 C17orf78Q8N4C9 275 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 ADPRHL1Q8NDY3 354 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 ADAMTS16Q8TE57 1224 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 IGFBPL1Q8WX77 278 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 PROX1Q92786 737 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 SLC41A3Q96GZ6 507 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 MOGAT1Q96PD6 335 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 ELAC2Q9BQ52 826 aaKnown RBP7.89□□□□□ -1.15
LINC00544-202ENST00000481738 ASPNQ9BXN1 380 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 CXorf56Q9H5V9 222 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 CISD1Q9NZ45 108 aaKnown RBP7.89□□□□□ -1.15
LINC00544-202ENST00000481738 LAMP3Q9UQV4 416 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 RCE1Q9Y256 329 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 AMDHD2Q9Y303 409 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 SH3GLB1Q9Y371 365 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 CORINQ9Y5Q5 1042 aa7.89□□□□□ -1.15
LINC00544-202ENST00000481738 OR6C65A6NJZ3 312 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 MS4A18H0YCH9 400 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 TRAF3IP2O43734 574 aaPredicted RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 AKAP8O43823 692 aaKnown RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 SHOX2O60902 331 aaPredicted RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 SLC43A1O75387 559 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 LYPD3O95274 346 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 WNT11O96014 354 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 SOD3P08294 240 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 DANCRP0C864 163 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 HLA-DOBP13765 273 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 PTAFRP25105 342 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 CD40P25942 277 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 CDH11P55287 796 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 PRPS1P60891 318 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 RPS4XP62701 263 aaKnown RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 ROR2Q01974 943 aaKnown RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 POU3F1Q03052 451 aaPredicted RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 PMS2P3Q13401 168 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 MS4A18Q3C1V0 323 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 TBRG1Q3YBR2 411 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 LRRC23Q53EV4 343 aaPredicted RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 HMBOX1Q6NT76 420 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 TTC33Q6PID6 262 aaPredicted RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 SLC22A25Q6T423 547 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 DEF8Q6ZN54 512 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 SPATA21Q7Z572 469 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 ARPINQ7Z6K5 226 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 YTHDF3Q7Z739 585 aaKnown RBP7.88□□□□□ -1.15
LINC00544-202ENST00000481738 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 UEVLDQ8IX04 471 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 MICU2Q8IYU8 434 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 SCAIQ8N9R8 606 aa7.88□□□□□ -1.15
LINC00544-202ENST00000481738 OR2T12Q8NG77 320 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms