RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 OR10Q1Q8NGQ4 319 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MFSD8Q8NHS3 518 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 RFWD2Q8NHY2 731 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 FBXO30Q8TB52 745 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 C10orf82Q8WW14 230 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 LIPHQ8WWY8 451 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 HSD17B8Q92506 261 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 RAB8BQ92930 207 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SLC38A4Q969I6 547 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 LRRC58Q96CX6 371 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CMTM5Q96DZ9 223 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SLC41A3Q96GZ6 507 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF845Q96IR2 970 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MARK4Q96L34 752 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 PPP1R36Q96LQ0 422 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 EPYCQ99645 322 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 PIP5K1AQ99755 562 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 PSD2Q9BQI7 771 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF559Q9BR84 538 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 GPATCH1Q9BRR8 931 aaKnown RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NSRP1Q9H0G5 558 aaKnown RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MYLK2Q9H1R3 596 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MEGF9Q9H1U4 602 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NANOGQ9H9S0 305 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 EFCAB1Q9HAE3 211 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 OBP2BQ9NPH6 170 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 RASSF1Q9NS23 344 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 FGFR1OP2Q9NVK5 253 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NDE1Q9NXR1 346 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 KLHL28Q9NXS3 571 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF226Q9NYT6 803 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 H2AFY2Q9P0M6 372 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ABCD2Q9UBJ2 740 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 OSGIN1Q9UJX0 560 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ING1Q9UK53 422 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 BAG5Q9UL15 447 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 RCE1Q9Y256 329 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ANGPT4Q9Y264 503 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 RASD1Q9Y272 281 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 VDAC3Q9Y277 283 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF443Q9Y2A4 671 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 TESMINQ9Y4I5 508 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CAPN7Q9Y6W3 813 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CSMD2Q7Z408 3487 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 APCP25054 2843 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NCOA6Q14686 2063 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 MYO9AB2RTY4 2548 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 A0A087WUJ7 227 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 A0A0B4J2E0 115 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 A0A1B0GX12 115 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 GMNCA6NCL1 334 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 LIPT2A6NK58 231 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 AQP7P3A6NL99 342 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 A6NNC1 897 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 FTCDNL1E5RQL4 147 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 RPL36A-HNRNPH2H7BZ11 118 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 C19orf84I3L1E1 186 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 PDLIM1O00151 329 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 FBP2O00757 339 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SMAD9O15198 467 aaKnown RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ENTPD5O75356 428 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 GCM2O75603 506 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 AQP8O94778 261 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 BCHEP06276 602 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 TSPAN19P0C672 248 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 PAX1P15863 534 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 NCF2P19878 526 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 CXCR1P25024 350 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 TACR3P29371 465 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 UGT2B10P36537 528 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 RFX3P48380 749 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 STARP49675 285 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 DIO1P49895 249 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 KLF10Q13118 480 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 MYBPHQ13203 477 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ITGADQ13349 1161 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 NFYCQ13952 458 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SCARB2Q14108 478 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SLC17A1Q14916 467 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 TOMM34Q15785 309 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SGCBQ16585 318 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 NRF1Q16656 503 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 TMEM176BQ3YBM2 270 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 NRN1LQ496H8 165 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF311Q5JNZ3 666 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 OR7E24Q6IFN5 339 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF474Q6S9Z5 364 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 TFAP2EQ6VUC0 442 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 C3P1Q6ZMU1 363 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 MEX3BQ6ZN04 569 aaKnown RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF836Q6ZNA1 936 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 CXXC5Q7LFL8 322 aaKnown RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 P4HA3Q7Z4N8 544 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 SPATA21Q7Z572 469 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 ABHD12BQ7Z5M8 362 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-213ENST00000480102 PIGWQ7Z7B1 504 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 GALNT5Q7Z7M9 940 aa4.34□□□□□ -1.71
PTCD3-213ENST00000480102 DHDDSQ86SQ9 333 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms