RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ELK4	P28324	431 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	APOBEC1	P41238	236 aa	Known RBP	13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	SLC1A3	P43003	542 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	CTBP2	P56545	445 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	EPS8	Q12929	822 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	IFI44L	Q53G44	452 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	WBP2NL	Q6ICG8	309 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	PGM2L1	Q6PCE3	622 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	GRINA	Q7Z429	371 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	CYP4Z1	Q86W10	505 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	CLIP4	Q8N3C7	705 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	SMYD1	Q8NB12	490 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	TPD52L3	Q96J77	140 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	USB1	Q9BQ65	265 aa	Known RBP	13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	RTN4R	Q9BZR6	473 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	GLRX2	Q9NS18	164 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	ACER3	Q9NUN7	267 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	MED17	Q9NVC6	651 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894		H0YC42	278 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	SEC14L5	O43304	696 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	AQP8	O94778	261 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	IFNW1	P05000	195 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	CD247	P20963	164 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	TCEA1	P23193	301 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	RYK	P34925	604 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	IDH2	P48735	452 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	TPD52	P55327	224 aa	Predicted RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	LSM11	P83369	360 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	QPRT	Q15274	297 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZSCAN26	Q16670	478 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	DUSP7	Q16829	419 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	CTU2	Q2VPK5	515 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	SLC25A53	Q5H9E4	307 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	PDSS1	Q5T2R2	415 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	SWT1	Q5T5J6	900 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	AGAP6	Q5VW22	663 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	RAET1L	Q5VY80	246 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	LCN8	Q6JVE9	175 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	CBLN3	Q6UW01	205 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	LSMEM1	Q8N8F7	131 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	KBTBD8	Q8NFY9	601 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	S100PBP	Q96BU1	408 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	ARHGDIG	Q99819	225 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	CADM1	Q9BY67	442 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	C12orf10	Q9HB07	376 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	RLIM	Q9NVW2	624 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	CISD1	Q9NZ45	108 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	SH3GLB1	Q9Y371	365 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZNF337	Q9Y3M9	751 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	FAM32A	Q9Y421	112 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	AP4B1	Q9Y6B7	739 aa		13.75	□□□□□ -0.21
HDLBP-238	ENST00000479894	CENPVL1	A0A0U1RR11	272 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	AQP12B	A6NM10	295 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894		B4DXG7	233 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	ETV2	O00321	342 aa	Predicted RBP	13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	PDE5A	O76074	875 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	PLG	P00747	810 aa	Predicted RBP	13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	OPN1SW	P03999	348 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	CSF3	P09919	207 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	PNMT	P11086	282 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	UMPS	P11172	480 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	NCK1	P16333	377 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	USF1	P22415	310 aa	Predicted RBP	13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	CLK1	P49759	484 aa	Known RBP	13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	FLOT2	Q14254	428 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	SGCB	Q16585	318 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	PLPPR5	Q32ZL2	321 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	ULK3	Q6PHR2	472 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	IL17REL	Q6ZVW7	336 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	ASRGL1	Q7L266	308 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	HMGN2P46	Q86SG4	172 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	AQP12A	Q8IXF9	295 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	DEPDC4	Q8N2C3	294 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	FAM156A	Q8NDB6	213 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	HSD17B8	Q92506	261 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	FAM168A	Q92567	244 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	CCDC124	Q96CT7	223 aa	Known RBP	13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	PYURF	Q96I23	114 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	HEATR1	Q9H583	2144 aa	Known RBP	13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	YY1AP1	Q9H869	796 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	USP22	Q9UPT9	525 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	VDAC3	Q9Y277	283 aa		13.74	□□□□□ -0.21
HDLBP-238	ENST00000479894	OR2M5	A3KFT3	312 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	SLC35F4	A4IF30	521 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	CLDN24	A6NM45	220 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	TPST1	O60507	370 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	THRB	P10828	461 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	PRKCA	P17252	672 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	POLR2H	P52434	150 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	CLDN20	P56880	219 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	SESN3	P58005	492 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	BSPH1	Q075Z2	132 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	MERTK	Q12866	999 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	TAB1	Q15750	504 aa		13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	FAM98B	Q52LJ0	330 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZNF613	Q6PF04	617 aa		13.73	□□□□□ -0.21

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