RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 LRRC42Q9Y546 428 aa6□□□□□ -1.45
USP48-208ENST00000479177 PCDHGA9Q9Y5G4 932 aaKnown RBP6□□□□□ -1.45
USP48-208ENST00000479177 ORC6Q9Y5N6 252 aa6□□□□□ -1.45
USP48-208ENST00000479177 AP4B1Q9Y6B7 739 aa6□□□□□ -1.45
USP48-208ENST00000479177 ATMQ13315 3056 aa6□□□□□ -1.45
USP48-208ENST00000479177 BOD1L1Q8NFC6 3051 aa6□□□□□ -1.45
USP48-208ENST00000479177 SVILO95425 2214 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 LAMA5O15230 3695 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 A0A087WV48 116 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 HTR3EA5X5Y0 456 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 UNC119BA6NIH7 251 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 H0YAE9 185 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 CDC42EP2O14613 210 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 BCKDKO14874 412 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 FZD7O75084 574 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 CBR3O75828 277 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 GLSO94925 669 aaPredicted RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 SP1P08047 785 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 GNAO1P09471 354 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 IFI30P13284 250 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ACADSP16219 412 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ZNF17P17021 662 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 HK1P19367 917 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 IL11P20809 199 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 GSTM3P21266 225 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 TCEA1P23193 301 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 CXCR1P25024 350 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 DPP4P27487 766 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ELK4P28324 431 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 EPHA2P29317 976 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 SRD5A2P31213 254 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 POLR2IP36954 125 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 APOBEC1P41238 236 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 EIF1P41567 113 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 TNFSF10P50591 281 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 TMPRSS3P57727 454 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 RPL11P62913 178 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 IL1RL1Q01638 556 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ALDH6A1Q02252 535 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 EGR4Q05215 589 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 CRYZQ08257 329 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 COX10Q12887 443 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 NPRL3Q12980 569 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 TAF11Q15544 211 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 TESK1Q15569 626 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 SLC36A3Q495N2 470 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ZNF766Q5HY98 468 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 WLSQ5T9L3 541 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 BORAQ6PGQ7 559 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 TTC33Q6PID6 262 aaPredicted RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 ZNF620Q6ZNG0 422 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 RASSF6Q6ZTQ3 369 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 TMPRSS11FQ6ZWK6 438 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 USP51Q70EK9 711 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 RRM2BQ7LG56 351 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 GALNTL5Q7Z4T8 443 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ADGRG3Q86Y34 549 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 KIF18BQ86Y91 864 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 DHRSXQ8N5I4 330 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 TMEM178AQ8NBL3 297 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 OR8D4Q8NGM9 314 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 OR13C2Q8NGS9 318 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 FANK1Q8TC84 345 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 SNRNP27Q8WVK2 155 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 CYGBQ8WWM9 190 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ZCCHC14Q8WYQ9 949 aaKnown RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 BPIFA2Q96DR5 249 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 KTI12Q96EK9 354 aaPredicted RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 SGTBQ96EQ0 304 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 GNRHR2Q96P88 292 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 SYT3Q9BQG1 590 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 PTDSS2Q9BVG9 487 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ANKRD60Q9BZ19 345 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 OR2B2Q9GZK3 357 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ZNF703Q9H7S9 590 aaPredicted RBP5.99□□□□□ -1.45
USP48-208ENST00000479177 KLHL1Q9NR64 748 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 FAM118AQ9NWS6 357 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 CHRNA9Q9UGM1 479 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 ENOPH1Q9UHY7 261 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 CSAG2Q9Y5P2 127 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 CDH10Q9Y6N8 788 aa5.99□□□□□ -1.45
USP48-208ENST00000479177 KIAA1549Q9HCM3 1950 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 TRAV36DV7A0A075B6V5 113 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 TRAV17A0A0B4J275 112 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 OR2M5A3KFT3 312 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 ZAR1LA6NP61 321 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 A8MVM7 634 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 EFCAB9A8MZ26 197 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 TAF4O00268 1085 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 SLC16A6O15403 523 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 ZNF208O43345 1280 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 DENRO43583 198 aaKnown RBP5.98□□□□□ -1.45
USP48-208ENST00000479177 EFNA2O43921 213 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 ZIC3O60481 467 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 OR7A10O76100 309 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 SOX14O95416 240 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 CH25HO95992 272 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 BGLAPP02818 100 aa5.98□□□□□ -1.45
USP48-208ENST00000479177 IGFBP1P08833 259 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms