RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CEP85LQ5SZL2 805 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 HHATQ5VTY9 493 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 WDR93Q6P2C0 686 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 LINGO2Q7L985 606 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 EPHX4Q8IUS5 362 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 KDM8Q8N371 416 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 CLIP4Q8N3C7 705 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 MAGEE2Q8TD90 523 aaPredicted RBP11.51□□□□□ -0.57
VCL-205ENST00000478896 STK35Q8TDR2 534 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 SLC38A5Q8WUX1 472 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 BCL2L2Q92843 193 aaPredicted RBP11.51□□□□□ -0.57
VCL-205ENST00000478896 ZBTB9Q96C00 473 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 LINC00470Q9BZP3 86 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 PLK3Q9H4B4 646 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 SEC61A2Q9H9S3 476 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 TPT1P8Q9HAU6 139 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 DYNLRB1Q9NP97 96 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 SLC6A13Q9NSD5 602 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 THUMPD1Q9NXG2 353 aaKnown RBP11.51□□□□□ -0.57
VCL-205ENST00000478896 CRNNQ9UBG3 495 aaPredicted RBP11.51□□□□□ -0.57
VCL-205ENST00000478896 RPS6KB2Q9UBS0 482 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.51□□□□□ -0.57
VCL-205ENST00000478896 FBXO9Q9UK97 447 aaPredicted RBP11.51□□□□□ -0.57
VCL-205ENST00000478896 PRDM4Q9UKN5 801 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 IFT52Q9Y366 437 aa11.51□□□□□ -0.57
VCL-205ENST00000478896 V9GYY5 206 aaPredicted RBP11.51□□□□□ -0.57
VCL-205ENST00000478896 LRP5LA4QPB2 252 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 TMEM229AB2RXF0 380 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 HDAC3O15379 428 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 AKAP8O43823 692 aaKnown RBP11.5□□□□□ -0.57
VCL-205ENST00000478896 SLC43A1O75387 559 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 SLC22A3O75751 556 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 IGKV3-15P01624 115 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 CELA3BP08861 270 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 PRG2P13727 222 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 C1DQ13901 141 aaKnown RBP11.5□□□□□ -0.57
VCL-205ENST00000478896 SQLEQ14534 574 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 CR1LQ2VPA4 569 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 C3orf36Q3SXR2 165 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 GTDC1Q4AE62 458 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 PDCD4Q53EL6 469 aaKnown RBP11.5□□□□□ -0.57
VCL-205ENST00000478896 LIPNQ5VXI9 398 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 SPATA21Q7Z572 469 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 GPR137CQ8N3F9 429 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 MREGQ8N565 214 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 NUP37Q8NFH4 326 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 MFSD8Q8NHS3 518 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 ITCHQ96J02 903 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 SPATA9Q9BWV2 254 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 NELFAQ9H3P2 528 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 ZNF442Q9H7R0 627 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 RCE1Q9Y256 329 aa11.5□□□□□ -0.57
VCL-205ENST00000478896 A0A0G2JPF8 293 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 SH3PXD2BA1X283 911 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 HNRNPCL2B2RXH8 293 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 HNRNPCL3B7ZW38 293 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 HNRNPCL1O60812 293 aaKnown RBP11.49□□□□□ -0.57
VCL-205ENST00000478896 NPIPB7O75200 414 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 STAMBPO95630 424 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 IGLV1-44P01699 117 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 C8BP07358 591 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 HNRNPCL4P0DMR1 293 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
VCL-205ENST00000478896 DAOP14920 347 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 NPR2P20594 1047 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 CHN2P52757 468 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 MVDP53602 400 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 ARF1P84077 181 aaKnown RBP11.49□□□□□ -0.57
VCL-205ENST00000478896 HOXC5Q00444 222 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 CEACAM16Q2WEN9 425 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 SVOPLQ8N434 492 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 MGARPQ8TDB4 240 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 NEU4Q8WWR8 484 aaPredicted RBP11.49□□□□□ -0.57
VCL-205ENST00000478896 ANKRD27Q96NW4 1050 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 PTDSS2Q9BVG9 487 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 THAP1Q9NVV9 213 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 SEC14L4Q9UDX3 406 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 PCDHB14Q9Y5E9 798 aa11.49□□□□□ -0.57
VCL-205ENST00000478896 C5orf58C9J3I9 102 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 FTCDNL1E5RQL4 147 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 SLCO1B7G3V0H7 640 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 AIM2O14862 343 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 SEC14L2O76054 403 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 ZCCHC18P0CG32 403 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 CBR1P16152 277 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 APEX1P27695 318 aaKnown RBP11.48□□□□□ -0.57
VCL-205ENST00000478896 THBS4P35443 961 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 ARR3P36575 388 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 NCALDP61601 193 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 EGR4Q05215 589 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 SNTB2Q13425 540 aaKnown RBP11.48□□□□□ -0.57
VCL-205ENST00000478896 MPP2Q14168 576 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 ADRM1Q16186 407 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 FAM69AQ5T7M9 428 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 MSANTD1Q6ZTZ1 278 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 MYPOPQ86VE0 399 aaPredicted RBP11.48□□□□□ -0.57
VCL-205ENST00000478896 FAM169BQ8N8A8 192 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 PIK3C3Q8NEB9 887 aa11.48□□□□□ -0.57
VCL-205ENST00000478896 BBS10Q8TAM1 723 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms